Detailed information of ANN28294-RA in Leptoseris scabra

Genomic Location: Scaffold_12__1_contigs__length_40020851:406169...423439
NR annotation: CAH3159474.1, unnamed protein product [Porites evermanni]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3U487E3 ubiquitin-protein ligase HECTD3 OS=Mus musculus OX=10090 GN=Hectd3 PE=1 SV=2
Q5T447E3 ubiquitin-protein ligase HECTD3 OS=Homo sapiens OX=9606 GN=HECTD3 PE=1 SV=1
Q14999Cullin-7 OS=Homo sapiens OX=9606 GN=CUL7 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001728 (this species only)
Ubiquitin familyE3|E3 activity|HECT · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03256
all species →		ANAPC10Anaphase-promoting complex, subunit 10 (APC10)FamilyInterproscan
PF00632
all species →		HECTHECT-domain (ubiquitin-transferase)DomainInterproscan
PF00078
all species →		RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008979
all species →		Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR004939
all species →		DomainAPC10/DOC domainInterproscan
IPR042469
all species →		FamilyE3 ubiquitin-protein ligase HECTD3Interproscan
IPR035983
all species →		Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000569
all species →		DomainHECT domainInterproscan
IPR000477
all species →		DomainReverse transcriptase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46654
all species →		E3 UBIQUITIN-PROTEIN LIGASE HECTD3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004842
all species →		Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0043161
all species →		Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN28294-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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