Gene detail

Detailed information of ANN28320-RA in Leptoseris scabra

Genomic Location: Scaffold_12__1_contigs__length_40020851:798371...811738
NR annotation: CAH3036230.1, unnamed protein product [Porites lobata]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9NPF5	DNA methyltransferase 1-associated protein 1 OS=Homo sapiens OX=9606 GN=DMAP1 PE=1 SV=1
Q9JI44	DNA methyltransferase 1-associated protein 1 OS=Mus musculus OX=10090 GN=Dmap1 PE=1 SV=1
Q7K3D8	DNA methyltransferase 1-associated protein 1 OS=Drosophila melanogaster OX=7227 GN=DMAP1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005145 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16282 all species →	SANT_DAMP1_like	SANT/Myb-like domain of DAMP1	Domain	Interproscan
PF05499 all species →	DMAP1	DNA methyltransferase 1-associated protein 1 (DMAP1)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032563 all species →	Domain	DAMP1, SANT/Myb-like domain	Interproscan
IPR008468 all species →	Domain	DNA methyltransferase 1-associated 1	Interproscan
IPR027109 all species →	Family	SWR1-complex protein 4/DNA methyltransferase 1-associated protein 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12855 all species →	DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0045892 all species →	Biological Process	negative regulation of DNA-templated transcription	Interproscan
GO:0000122 all species →	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0000812 all species →	Cellular Component	Swr1 complex	Interproscan
GO:0003714 all species →	Molecular Function	transcription corepressor activity	Interproscan
GO:0004402 all species →	Molecular Function	histone acetyltransferase activity	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0006338 all species →	Biological Process	chromatin remodeling	Interproscan
GO:0035267 all species →	Cellular Component	NuA4 histone acetyltransferase complex	Interproscan
GO:0043486 all species →	Biological Process	obsolete histone exchange	Interproscan
GO:0043967 all species →	Biological Process	obsolete histone H4 acetylation	Interproscan
GO:0043968 all species →	Biological Process	obsolete histone H2A acetylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11324	DMAP1, SWC4, EAF2; DNA methyltransferase 1-associated protein 1	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.