Gene detail

Detailed information of ANN28343-RA in Montipora grisea

Genomic Location: Scaffold_172__1_contigs__length_171470:99790...101504
NR annotation: MCB0835348.1, NAD(P)H-dependent oxidoreductase subunit E [Bacteroidota bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P22317	NAD-reducing hydrogenase HoxS subunit alpha OS=Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) OX=381666 GN=hoxF PE=1 SV=1
O52682	Bifurcating [FeFe] hydrogenase beta subunit OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=hydB PE=1 SV=1
P56913	NADH-quinone oxidoreductase subunit F 2 OS=Rhizobium meliloti (strain 1021) OX=266834 GN=nuoF2 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01512 all species →	Complex1_51K	Respiratory-chain NADH dehydrogenase 51 Kd subunit	Family	Interproscan
PF01257 all species →	2Fe-2S_thioredx	Thioredoxin-like [2Fe-2S] ferredoxin	Family	Interproscan
PF10589 all species →	NADH_4Fe-4S	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037225 all species →	Homologous_superfamily	NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily	Interproscan
IPR041921 all species →	Homologous_superfamily	NADH-quinone oxidoreductase subunit E, N-terminal	Interproscan
IPR011538 all species →	Domain	NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain	Interproscan
IPR037207 all species →	Homologous_superfamily	NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily	Interproscan
IPR019575 all species →	Domain	NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain	Interproscan
IPR001949 all species →	Conserved_site	NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43578 all species →	NADH-QUINONE OXIDOREDUCTASE SUBUNIT F	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0051539 all species →	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan
GO:0008137 all species →	Molecular Function	NADH dehydrogenase (ubiquinone) activity	Interproscan
GO:0010181 all species →	Molecular Function	FMN binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18005	hoxF; [NiFe] hydrogenase diaphorase moiety large subunit	EC:1.12.1.2	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.