Gene detail

Detailed information of ANN28346-RA in Leptoseris scabra

Genomic Location: Scaffold_12__1_contigs__length_40020851:1172847...1188521
NR annotation: CAH3028125.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q28DB0	Tetratricopeptide repeat protein 39B OS=Xenopus tropicalis OX=8364 GN=ttc39b PE=2 SV=1
Q5XHH9	Tetratricopeptide repeat protein 39B OS=Xenopus laevis OX=8355 GN=ttc39b PE=2 SV=1
A2ACP1	Tetratricopeptide repeat protein 39A OS=Mus musculus OX=10090 GN=Ttc39a PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13174	TPR_6	Tetratricopeptide repeat	Repeat	Interproscan
PF10300	Iml2-TPR_39	Iml2/Tetratricopeptide repeat protein 39	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR019412	Family	Inclusion body clearance protein Iml2/Tetratricopeptide repeat protein 39	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31859	TETRATRICOPEPTIDE REPEAT PROTEIN 39 FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24943	TTC39; tetratricopeptide repeat protein 39	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala