Detailed information of ANN28389-RA in Montipora grisea

Genomic Location: Scaffold_3498__1_contigs__length_36097:22560...25280
NR annotation: MCB0461526.1, valine--tRNA ligase [Flavobacteriaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0M5I5Valine--tRNA ligase OS=Christiangramia forsetii (strain DSM 17595 / CGMCC 1.15422 / KT0803) OX=411154 GN=valS PE=3 SV=1
Q5LGN1Valine--tRNA ligase OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / LMG 10263 / NCTC 9343 / Onslow / VPI 2553 / EN-2) OX=272559 GN=valS PE=3 SV=1
Q64XH6Valine--tRNA ligase OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=valS PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00133tRNA-synt_1tRNA synthetases class I (I, L, M and V)DomainInterproscan
PF10458Val_tRNA-synt_CValyl tRNA synthetase tRNA binding armDomainInterproscan
PF08264Anticodon_1Anticodon-binding domain of tRNA ligaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009008Homologous_superfamilyValyl/Leucyl/Isoleucyl-tRNA synthetase, editing domainInterproscan
IPR001412Conserved_siteAminoacyl-tRNA synthetase, class I, conserved siteInterproscan
IPR002303FamilyValine-tRNA ligaseInterproscan
IPR002300DomainAminoacyl-tRNA synthetase, class IaInterproscan
IPR019499DomainValyl-tRNA synthetase, tRNA-binding armInterproscan
IPR033705DomainValyl tRNA synthetase, anticodon-binding domainInterproscan
IPR013155DomainMethionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-bindingInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR037118Homologous_superfamilyValyl-tRNA synthetase, tRNA-binding arm superfamilyInterproscan
IPR009080Homologous_superfamilyAminoacyl-tRNA synthetase, class Ia, anticodon-bindingInterproscan
IPR010978Homologous_superfamilyClass I and II aminoacyl-tRNA synthetase, tRNA-binding armInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11946VALYL-TRNA SYNTHETASESInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0002161Molecular Functionaminoacyl-tRNA editing activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0004832Molecular Functionvaline-tRNA ligase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006438Biological Processvalyl-tRNA aminoacylationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01873VARS, valS; valyl-tRNA synthetaseEC:6.1.1.9
Transfer RNA biogenesisko03016deepkoala

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