Detailed information of ANN28417-RA in Montipora grisea

Genomic Location: Scaffold_4279__1_contigs__length_32820:12348...15859
NR annotation: GBD39892.1, 4-hydroxy-2,2'-bipyrrole-5-methanol synthase PigH [bacterium HR37]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B0KC208-amino-7-oxononanoate synthase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=Teth39_0287 PE=3 SV=1
B0K5908-amino-7-oxononanoate synthase OS=Thermoanaerobacter sp. (strain X514) OX=399726 GN=bioF PE=3 SV=1
B1YMC68-amino-7-oxononanoate synthase OS=Exiguobacterium sibiricum (strain DSM 17290 / CCUG 55495 / CIP 109462 / JCM 13490 / 255-15) OX=262543 GN=Exig_1033 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003562 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00155
all species →
Aminotran_1_2Aminotransferase class I and IIDomainInterproscan
PF07238
all species →
PilZPilZ domainDomainInterproscan
PF13185
all species →
GAF_2GAF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001917
all species →
Binding_siteAminotransferase, class-II, pyridoxal-phosphate binding siteInterproscan
IPR015422
all species →
Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR050087
all species →
Family8-amino-7-oxononanoate synthase class-IIInterproscan
IPR004839
all species →
DomainAminotransferase, class I/classIIInterproscan
IPR029016
all species →
Homologous_superfamilyGAF-like domain superfamilyInterproscan
IPR009875
all species →
DomainPilZ domainInterproscan
IPR015421
all species →
Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR003018
all species →
DomainGAF domainInterproscan
IPR015424
all species →
Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13693
all species →
CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016740
all species →
Molecular Functiontransferase activityInterproscan
GO:0009058
all species →
Biological Processbiosynthetic processInterproscan
GO:0030170
all species →
Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0035438
all species →
Molecular Functioncyclic-di-GMP bindingInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN28417-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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