Detailed information of ANN28453-RA in Montipora grisea

Genomic Location: Scaffold_2141__1_contigs__length_45461:10797...11292
NR annotation: WP_179021669.1, tRNA pseudouridine(55) synthase TruB [Winogradskyella forsetii]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9RB36tRNA pseudouridine synthase B OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / JCM 8514 / BCRC 14874 / CCUG 350202 / NBRC 14942 / NCIMB 11054 / UW101) OX=376686 GN=truB PE=3 SV=1
Q5LJ29tRNA pseudouridine synthase B OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / LMG 10263 / NCTC 9343 / Onslow / VPI 2553 / EN-2) OX=272559 GN=truB PE=3 SV=1
Q650L8tRNA pseudouridine synthase B OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=truB PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01509TruB_NTruB family pseudouridylate synthase (N terminal domain)FamilyInterproscan
PF16198TruB_C_2tRNA pseudouridylate synthase B C-terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002501DomainPseudouridine synthase II, N-terminalInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR014780FamilytRNA pseudouridine synthase II, TruBInterproscan
IPR032819DomaintRNA pseudouridylate synthase B, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13767TRNA-PSEUDOURIDINE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006396Biological ProcessRNA processingInterproscan
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006400Biological ProcesstRNA modificationInterproscan
GO:1990481Biological ProcessmRNA pseudouridine synthesisInterproscan

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