Detailed information of ANN28488-RA in Montipora grisea

Genomic Location: Scaffold_1872__1_contigs__length_48616:2892...15914
NR annotation: XP_041457565.1, ATP-dependent DNA helicase DDX11-like isoform X2 [Lytechinus variegatus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6AXC6ATP-dependent DNA helicase DDX11 OS=Mus musculus OX=10090 GN=Ddx11 PE=1 SV=2
F1R345ATP-dependent DNA helicase DDX11 OS=Danio rerio OX=7955 GN=ddx11 PE=2 SV=1
Q92771Putative ATP-dependent DNA helicase DDX12 OS=Homo sapiens OX=9606 GN=DDX12P PE=5 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06733DEAD_2DEAD_2FamilyInterproscan
PF21355TRAF-mep_MATHTRAF/meprin, MATH domainDomainInterproscan
PF02176zf-TRAFTRAF-type zinc fingerFamilyInterproscan
PF13307Helicase_C_2Helicase C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010614DomainRAD3-like helicase, DEADInterproscan
IPR049342DomainTRAF1-6/MEP1A/B-like, MATH domainInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR001293DomainZinc finger, TRAF-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR006555DomainATP-dependent helicase, C-terminalInterproscan
IPR006554DomainHelicase-like, DEXD box c2 typeInterproscan
IPR014013DomainHelicase superfamily 1/2, ATP-binding domain, DinG/Rad3-typeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002083DomainMATH/TRAF domainInterproscan
IPR045028FamilyHelicase superfamily 1/2, DinG/Rad3-likeInterproscan
IPR008974Homologous_superfamilyTRAF-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0016818Molecular Functionhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan
GO:0034085Biological Processestablishment of sister chromatid cohesionInterproscan

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