Detailed information of ANN28563-RA in Leptoseris scabra

Genomic Location: Scaffold_12__1_contigs__length_40020851:5577963...5584575
NR annotation: CAH3020851.1, unnamed protein product, partial [Porites evermanni]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6P5L8Hydroxysteroid dehydrogenase-like protein 2 OS=Danio rerio OX=7955 GN=hsdl2 PE=2 SV=1
Q66KC4Hydroxysteroid dehydrogenase-like protein 2 OS=Xenopus tropicalis OX=8364 GN=hsdl2 PE=2 SV=1
Q6PAY8Hydroxysteroid dehydrogenase-like protein 2 OS=Xenopus laevis OX=8355 GN=hsdl2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002538 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02036
all species →
SCP2SCP-2 sterol transfer familyDomainInterproscan
PF00106
all species →
adh_shortshort chain dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051935
all species →
FamilyHydroxysteroid dehydrogenase-like protein 2Interproscan
IPR002347
all species →
FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR003033
all species →
DomainSCP2 sterol-binding domainInterproscan
IPR036527
all species →
Homologous_superfamilySCP2 sterol-binding domain superfamilyInterproscan
IPR036291
all species →
Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42808
all species →
HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005739
all species →
Cellular ComponentmitochondrionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN28563-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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