Gene detail

Detailed information of ANN28620-RA in Montipora grisea

Genomic Location: Scaffold_1543__1_contigs__length_53516:18558...19837
NR annotation: MCE2486660.1, 50S ribosomal protein L3 [Desulfurellaceae bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A0LIJ0	Large ribosomal subunit protein uL3 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) OX=335543 GN=rplC PE=3 SV=1
A0LRM0	Large ribosomal subunit protein uL3 OS=Acidothermus cellulolyticus (strain ATCC 43068 / DSM 8971 / 11B) OX=351607 GN=rplC PE=3 SV=1
Q3A6P7	Large ribosomal subunit protein uL3 OS=Syntrophotalea carbinolica (strain DSM 2380 / NBRC 103641 / GraBd1) OX=338963 GN=rplC PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00297	Ribosomal_L3	Ribosomal protein L3	Family	Interproscan
PF00573	Ribosomal_L4	Ribosomal protein L4/L1 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019926	Conserved_site	Large ribosomal subunit protein uL3, conserved site	Interproscan
IPR019927	Family	Large ribosomal subunit protein uL3, bacterial/organelle-type	Interproscan
IPR013005	Family	Large ribosomal subunit protein uL4-like	Interproscan
IPR023574	Homologous_superfamily	Large ribosomal subunit protein uL4 domain superfamily	Interproscan
IPR000597	Family	Large ribosomal subunit protein uL3	Interproscan
IPR009000	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan
IPR002136	Family	Large ribosomal subunit protein uL4	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11229	50S RIBOSOMAL PROTEIN L3	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0022625	Cellular Component	cytosolic large ribosomal subunit	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02988	RP-S5, MRPS5, rpsE; small subunit ribosomal protein S5	-	Ribosome	ko03011	deepkoala