Gene detail

Detailed information of ANN28644-RA in Leptoseris scabra

Genomic Location: Scaffold_12__1_contigs__length_40020851:7689365...7699865
NR annotation: CAH3105675.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
B3EWY9	Mucin-like protein (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
B3EWZ3	Coadhesin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
G5ECS8	A disintegrin and metalloproteinase with thrombospondin motifs adt-1 OS=Caenorhabditis elegans OX=6239 GN=adt-1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00092	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF00090	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002035	Domain	von Willebrand factor, type A	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR036465	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR050525	Family	Extracellular Matrix Assembly and Organization	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24020	COLLAGEN ALPHA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0062023	Cellular Component	collagen-containing extracellular matrix	Interproscan