Gene detail

Detailed information of ANN28645-RA in Leptoseris scabra

Genomic Location: Scaffold_12__1_contigs__length_40020851:7722167...7749679
NR annotation: CAH3153100.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN28645-RA

ATGCCTTCCAGAACACAAGCGAAAAATACCGCTAGCTCTTTCGAATGGATTGGTAATGGGACTGAAGATGACGGCAAAGTTTTTTACAGTGAATTCAAGTTCAATGAAAATTTGATACAATCTGGTGACGACGTCATTATCAATGGTAATGATAAGGATGAATACTTTGTTGGACATGTGGACAGATTATACGAACGCAAGGGAACCAAGGATCCTAACAGAGCAATAATACACTGGTACTTCACGTGTAAGGAACTGAAAAAATGCTCTGGCAAAACAAACATTGTTATTGCCAAACCCTCAAGAGAGTTGTTCTTGCCTTGCCTAGATAGCGTCAAAGATAGCATAGCGGACATTGATGCTGAGACCATCTCCAGAAAATGCACAGTTTTAAAACTTAAGCTGCAGGATCTACCACCAAACTGCTCAAATTCTGACACACAGCAAAGCTTGTTTTATGTGCGATATAAGTTTGACCAACACTATAACCTTCATCCCATTAATAAGAGGATTGCGAGAGAATCTGCTTCGAAAAGAGAGTGTGACTTGTTGGGTGGTGTAAGTAATACCACAACTCCAAATACAAATCGAAGGGGCACGCCAAGGAGATCATCGACCATGAAACAGAATTATGTTATTGAAAATGGGGTGAACAGTACTGCACGAACACCACAGGTGAAAAAGACACCTGCAAGAACAAAAATTGTTGACGATTCATCAGTAAGCAGAAAGAGCAAGACTCCTGCTAAGGTCAACAATAAAATGGTAAACAACAAATGCATAGTGCCAGTTGAGCCATTAGTTTTCAATGGCGACTGTGTTACACCAAGTCGTGGTAAGAGAAGGGCGAGCCGCAGCATCCCTGATGAGTCCAGTGTGACACCCAAGAGAAGCAAGAGTGGCAGTCAGGGTGTAAAGAGGACAAAAGAACCAGTAACATCGCCGAGGCAAAGATTTGGTACTGCTGAAGTTTTGGAGCAAGTATTTGAGGAGGATGAAGAAAAAGATGTAAGCGACAATGACAGTGTGTTTGACCCCAGCGACGGCAGGGATTCATCTGATGATGATGACGATGATAAGGATTATGATGATGATGATGATGATGATTTCTGTGAGACTGCAGCTAAGAGTAGGAATAGAGGTCAGAGCAAGAGCACACCAGCAAGAGCTCTGAGGTCTGCTAAGAAAACGCAGACATTTACATCCATACAAGACACACCCAGAGGTAAATATGCTGCTAAGACTCCGTCGAGAGGAAAACCATCCCAGAAAACACCTCGGAAGACACCAGTGCAGCAGAGAGCAAAAACGCCGAAGACTGTTGGCAAGACACCCAAGACACCCGCGGCGAGTAGCACCAAGCGTCCATCAAGGAATAGCGTGATGACTCCCAGCATTCCTGACAGACAGCAGCCTTGCAAGACACCAGGCACACCGCTGGAGTTAGCTCGAAAAAAATTACACGTGTCAGCTGTGCCCACTTCTCTGCCATGCCGCGACAAGGAGTTTAATGACATATATGGCTTTGTGGAGGGGAAGCTGGAAGATGGAACGGGAGGCTGTATGTACATCTCTGGGGTCCCAGGCACAGGCAAGACAGCCACTGTACATGAAGTCATTCGCAGTATTGAGGAAGCTCAAGATGATTTGCCAGAGTTCAAGTTTGTGGAAATTAACGGAATGAAGTTAACGGAACCTGCTCAGGCTTACTCTACCTTCCTTAAGCCATTGTACATTGTACGTCTTTCCATTGAGCTAGAAGAAAACACGGAGAACAATGTAACTTACAATATCACGAACAAGGCGTTTCTCCTCACCGCTACTCTATTTCGTTATGCTTCGTTCTTTGGTGTGATAGCGCTAAGTGCAGACCGATTCTTGGCCATTTACCTTCATCTCAGATACCAAGAACTTGTCACTCACAAGCGTGTTGTTGTTGTGGTGATATTCATATGGGTGCTCAGTACATTTCTTTCGTTGGCTAGGCTGTGGACTCCAATGGGAATCATTTATTTGATTTTTGCTATCATCGAGGCTACTTGTCTGATAACTGCAGCACTGCTAAGTTACAAGATATTTCTAGCCGTACGACGCCACACTCGTGCAATCCAAGTTTCGTTTCAAGTACAGCAAGCGGCACAAAATGTCGCGATGGCGAATGTCGGCAGGTTAAAAAAATCCGCGCTTGGTGCAGTGTACCTGTACATCGTGTTTTTGATGTGCTATTTGCCAAATACTTGTTATTTATTTATAGAGGTTATAGAACCTCAATCAGACATCGCCTTGGAGGGTTTATCAAGTTACAGTAAGACCTTGCTGCTGACGGGACAGAAGGCCACTCCTGAACACGCCTCAAACCTGTTGGACAGGCTTTTTAGCAACCCAGCACCTAAGCGGGATCCTGTTATCCTATTGGTGGATGAGTTGGATCTGTTGTGGACTCGTAAACAGCACGTGTTATACAATCTTTTTGAGTGGCCGACGCGGAGACACTCGCGGCTGATCGTTTTGGCCATTGCAAACACCATGGATTTGCCGGAAAGAATTATGATGAAGCGAGTCTCCAGTCGCTTGGGTCTGACTCGGTTGACTTTCCAGCCATACACCTTTTCACAGCTTCAACAGATTGTTATGTCCCGGATTGCTGGATTGAACGCATTTGAACCTGATGCAATACAGCTTGTCTCCAGAAAGGTTGCTGCTGTGTCCGGCGATGCCCGCCGCTGTTTAGACATTTGCCGCAGAGCAGTGGAGATAGCAGATTCACGTTCCAATAAGAAAGGCACCGCATTGGTTGGAATGAGTCACGTGGATGCCGCACTGCAGGATATGTTCTCTTCGCCCAAGATACGAGCCATGATGTGCTTATCGTATATGGAGGGTCTATTTTTAAAGTCGCTTATTGCCGAGTTTCGTAGCTCAGGATTGGAAGAAGCAACGTTTGGAGATGTATTTCAACAACTCGTCGATTTTTGTCGTATTGAAGGAGTCTCGTCCCCTTCTCCATCAGAAGCCGCGGCTGTTTGTTCACGCTTAGGGGCCTGGAGACTACTTTTAGTGGAGTCTGGCCGTCGCGACCTGGAGCAGAGGATTCGCTTGAATGTCAACCAAGATGATGCATTGTATGCTCTCCAAAAGAAACGCACGTGA

Transcript

ANN28645-RA

Protein

Uniprot

Uniprot term	Description
Q9Z1N2	Origin recognition complex subunit 1 OS=Mus musculus OX=10090 GN=Orc1 PE=1 SV=2
Q80Z32	Origin recognition complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Orc1 PE=2 SV=1
Q13415	Origin recognition complex subunit 1 OS=Homo sapiens OX=9606 GN=ORC1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF09079	Cdc6_C	CDC6, C terminal winged helix domain	Domain	Interproscan
PF01426	BAH	BAH domain	Domain	Interproscan
PF17872	AAA_lid_10	AAA lid domain	Domain	Interproscan
PF13191	AAA_16	AAA ATPase domain	Domain	Interproscan
PF00001	7tm_1	7 transmembrane receptor (rhodopsin family)	Family	Interproscan
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR015163	Domain	Cdc6, C-terminal	Interproscan
IPR001025	Domain	Bromo adjacent homology (BAH) domain	Interproscan
IPR041083	Domain	AAA lid domain	Interproscan
IPR043151	Homologous_superfamily	Bromo adjacent homology (BAH) domain superfamily	Interproscan
IPR000276	Family	G protein-coupled receptor, rhodopsin-like	Interproscan
IPR050311	Family	Origin Recognition Complex 1/Cell Division Control Protein 6	Interproscan
IPR041664	Domain	Orc1-like, AAA ATPase domain	Interproscan
IPR017452	Domain	GPCR, rhodopsin-like, 7TM	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10763	CELL DIVISION CONTROL PROTEIN 6-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003682	Molecular Function	chromatin binding	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0003688	Molecular Function	DNA replication origin binding	Interproscan
GO:0005664	Cellular Component	nuclear origin of replication recognition complex	Interproscan
GO:0006270	Biological Process	DNA replication initiation	Interproscan
GO:0033314	Biological Process	mitotic DNA replication checkpoint signaling	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02603	ORC1; origin recognition complex subunit 1	-	Chromosome and associated proteins	ko03036	deepkoala