Detailed information of ANN28656-RA in Montipora grisea

Genomic Location: Scaffold_1258__1_contigs__length_58447:4632...8619
NR annotation: NIP30112.1, hypothetical protein [Candidatus Dadabacteria bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P0CAU3RNA polymerase-binding transcription factor DksA OS=Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15) OX=190650 GN=dksA PE=3 SV=1
B8H0C0RNA polymerase-binding transcription factor DksA OS=Caulobacter vibrioides (strain NA1000 / CB15N) OX=565050 GN=dksA PE=3 SV=1
P80872General stress protein 16O OS=Bacillus subtilis (strain 168) OX=224308 GN=yocK PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0014655 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21157
all species →
DksA_CCDnaK suppressor protein DksA, coiled-coil domainCoiled-coilInterproscan
PF01258
all species →
zf-dskA_traRProkaryotic dksA/traR C4-type zinc fingerFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048489
all species →
DomainDnaK suppressor protein DksA, N-terminal domainInterproscan
IPR000962
all species →
DomainZinc finger, DksA/TraR C4-typeInterproscan
IPR037187
all species →
Homologous_superfamilyDksA, N-terminal domain superfamilyInterproscan
IPR020458
all species →
Conserved_siteZinc finger, DksA/TraR C4-type conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33823
all species →
RNA POLYMERASE-BINDING TRANSCRIPTION FACTOR DKSA-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN28656-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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