Gene detail

Detailed information of ANN28660-RA in Montipora grisea

Genomic Location: Scaffold_1258__1_contigs__length_58447:45766...47114
NR annotation: CAD7236922.1, unnamed protein product, partial [Cyprideis torosa]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6MGY5	Uridylate kinase OS=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIMB 9529 / HD100) OX=264462 GN=pyrH PE=3 SV=1
Q3AB79	Uridylate kinase OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) OX=246194 GN=pyrH PE=3 SV=1
Q2IMM2	Uridylate kinase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) OX=290397 GN=pyrH PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0012477 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00889 all species →	EF_TS	Elongation factor TS	Family	Interproscan
PF00696 all species →	AA_kinase	Amino acid kinase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009060 all species →	Homologous_superfamily	UBA-like superfamily	Interproscan
IPR036402 all species →	Homologous_superfamily	Elongation factor Ts, dimerisation domain superfamily	Interproscan
IPR036393 all species →	Homologous_superfamily	Acetylglutamate kinase-like superfamily	Interproscan
IPR015963 all species →	Family	Uridylate kinase, bacteria	Interproscan
IPR014039 all species →	Domain	Translation elongation factor EFTs/EF1B, dimerisation	Interproscan
IPR001816 all species →	Family	Translation elongation factor EFTs/EF1B	Interproscan
IPR018101 all species →	Conserved_site	Translation elongation factor Ts, conserved site	Interproscan
IPR001048 all species →	Domain	Aspartate/glutamate/uridylate kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42833 all species →	URIDYLATE KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0006225 all species →	Biological Process	UDP biosynthetic process	Interproscan
GO:0033862 all species →	Molecular Function	UMP kinase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006221 all species →	Biological Process	pyrimidine nucleotide biosynthetic process	Interproscan
GO:0003746 all species →	Molecular Function	translation elongation factor activity	Interproscan
GO:0006414 all species →	Biological Process	translational elongation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN28660-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.