Gene detail

Detailed information of ANN28667-RA in Montipora grisea

Genomic Location: Scaffold_380__1_contigs__length_102645:81721...82539
NR annotation: MAW04245.1, tRNA dihydrouridine synthase DusB [Alteromonas sp.]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9KV66	tRNA-dihydrouridine synthase B OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=dusB PE=3 SV=2
Q8CWL2	tRNA-dihydrouridine synthase B OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=dusB PE=3 SV=2
Q8EJR8	tRNA-dihydrouridine synthase B OS=Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1) OX=211586 GN=dusB PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01207	Dus	Dihydrouridine synthase (Dus)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035587	Domain	DUS-like, FMN-binding domain	Interproscan
IPR018517	Conserved_site	tRNA-dihydrouridine synthase, conserved site	Interproscan
IPR004652	Family	tRNA-dihydrouridine synthase DusB-like	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR001269	Family	tRNA-dihydrouridine synthase	Interproscan
IPR024036	Homologous_superfamily	tRNA-dihydrouridine synthase, putative, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45846	TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008033	Biological Process	tRNA processing	Interproscan
GO:0017150	Molecular Function	tRNA dihydrouridine synthase activity	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05540	dusB; tRNA-dihydrouridine synthase B	EC:1.-.-.-	Transfer RNA biogenesis	ko03016	deepkoala