Detailed information of ANN28712-RA in Montipora grisea

Genomic Location: Scaffold_5085__1_contigs__length_30354:16216...19504
NR annotation: CAE7313242.1, lpdG [Symbiodinium pilosum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2SD35Succinate--CoA ligase [ADP-forming] subunit beta OS=Hahella chejuensis (strain KCTC 2396) OX=349521 GN=sucC PE=3 SV=1
A6VZ30Succinate--CoA ligase [ADP-forming] subunit beta OS=Marinomonas sp. (strain MWYL1) OX=400668 GN=sucC PE=3 SV=1
Q5QU21Succinate--CoA ligase [ADP-forming] subunit beta OS=Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) OX=283942 GN=sucC PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00549Ligase_CoACoA-ligaseDomainInterproscan
PF02852Pyr_redox_dimPyridine nucleotide-disulphide oxidoreductase, dimerisation domainDomainInterproscan
PF07992Pyr_redox_2Pyridine nucleotide-disulphide oxidoreductaseDomainInterproscan
PF02629CoA_bindingCoA binding domainDomainInterproscan
PF08442ATP-grasp_2ATP-grasp domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016102Homologous_superfamilySuccinyl-CoA synthetase-likeInterproscan
IPR005809FamilySuccinate--CoA ligase-like, beta subunitInterproscan
IPR005811DomainATP-citrate synthase/succinyl-CoA ligase, C-terminal domainInterproscan
IPR004099DomainPyridine nucleotide-disulphide oxidoreductase, dimerisation domainInterproscan
IPR013815Homologous_superfamilyATP-grasp fold, subdomain 1Interproscan
IPR023753DomainFAD/NAD(P)-binding domainInterproscan
IPR011761DomainATP-grasp foldInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR016156Homologous_superfamilyFAD/NAD-linked reductase, dimerisation domain superfamilyInterproscan
IPR017866Conserved_siteSuccinyl-CoA synthetase, beta subunit, conserved siteInterproscan
IPR033847Conserved_siteATP-citrate lyase/succinyl-CoA ligase, conserved siteInterproscan
IPR003781DomainCoA-bindingInterproscan
IPR017440Active_siteATP-citrate lyase/succinyl-CoA ligase, active siteInterproscan
IPR005810FamilySuccinyl-CoA ligase, alpha subunitInterproscan
IPR013650DomainATP-grasp fold, succinyl-CoA synthetase-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11815SUCCINYL-COA SYNTHETASE BETA CHAINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004775Molecular Functionsuccinate-CoA ligase (ADP-forming) activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006099Biological Processtricarboxylic acid cycleInterproscan
GO:0006104Biological Processsuccinyl-CoA metabolic processInterproscan
GO:0042709Cellular Componentsuccinate-CoA ligase complexInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0050660Molecular Functionflavin adenine dinucleotide bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01902sucD; succinyl-CoA synthetase alpha subunitEC:6.2.1.5
Carbon fixation pathways in prokaryotesko00720deepkoala

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