Gene detail

Detailed information of ANN28780-RA in Montipora grisea

Genomic Location: Scaffold_79__1_contigs__length_335549:269978...271761
NR annotation: MXX41068.1, tryptophan--tRNA ligase [Gemmatimonadota bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q7VIP6	Tryptophan--tRNA ligase OS=Helicobacter hepaticus (strain ATCC 51449 / 3B1) OX=235279 GN=trpS PE=3 SV=1
Q7MAE0	Tryptophan--tRNA ligase OS=Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / CCUG 13145 / JCM 31913 / LMG 7466 / NCTC 11488 / FDC 602W) OX=273121 GN=trpS PE=3 SV=1
P56396	Tryptophan--tRNA ligase OS=Helicobacter pylori (strain ATCC 700392 / 26695) OX=85962 GN=trpS PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00218	IGPS	Indole-3-glycerol phosphate synthase	Domain	Interproscan
PF00579	tRNA-synt_1b	tRNA synthetases class I (W and Y)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002306	Family	Tryptophan-tRNA ligase	Interproscan
IPR013798	Domain	Indole-3-glycerol phosphate synthase domain	Interproscan
IPR050203	Family	Tryptophan--tRNA ligase	Interproscan
IPR001468	Conserved_site	Indole-3-glycerol phosphate synthase, conserved site	Interproscan
IPR001412	Conserved_site	Aminoacyl-tRNA synthetase, class I, conserved site	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR011060	Homologous_superfamily	Ribulose-phosphate binding barrel	Interproscan
IPR002305	Family	Aminoacyl-tRNA synthetase, class Ic	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR024109	Family	Tryptophan-tRNA ligase, bacterial-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43766	TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004830	Molecular Function	tryptophan-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006436	Biological Process	tryptophanyl-tRNA aminoacylation	Interproscan
GO:0004425	Molecular Function	indole-3-glycerol-phosphate synthase activity	Interproscan
GO:0006568	Biological Process	tryptophan metabolic process	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan