Gene detail

Detailed information of ANN28823-RA in Montipora grisea

Genomic Location: Scaffold_98__1_contigs__length_268260:119238...121322
NR annotation: MBX2850304.1, DEAD/DEAH box helicase [Phycisphaeraceae bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P25888	ATP-dependent RNA helicase RhlE OS=Escherichia coli (strain K12) OX=83333 GN=rhlE PE=1 SV=3
O25029	DEAD-box ATP-dependent RNA helicase RhpA OS=Helicobacter pylori (strain ATCC 700392 / 26695) OX=85962 GN=rhpA PE=1 SV=1
B9XXL6	DEAD-box ATP-dependent RNA helicase RhpA OS=Helicobacter pylori (strain B128) OX=544406 GN=rhpA PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02870	Methyltransf_1N	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain	Domain	Interproscan
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF01035	DNA_binding_1	6-O-methylguanine DNA methyltransferase, DNA binding domain	Domain	Interproscan
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014048	Domain	Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding	Interproscan
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR008332	Domain	Methylguanine DNA methyltransferase, ribonuclease-like domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR014014	Domain	RNA helicase, DEAD-box type, Q motif	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR000629	Conserved_site	ATP-dependent RNA helicase DEAD-box, conserved site	Interproscan
IPR036631	Homologous_superfamily	Methylated DNA-protein cysteine methyltransferase domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR001497	Active_site	Methylated-DNA-[protein]-cysteine S-methyltransferase, active site	Interproscan
IPR036217	Homologous_superfamily	Methylated DNA-protein cysteine methyltransferase, DNA binding domain	Interproscan
IPR023546	Family	Methylated-DNA--protein-cysteine methyltransferase	Interproscan
IPR050079	Family	DEAD box RNA helicase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47959	ATP-DEPENDENT RNA HELICASE RHLE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0003908	Molecular Function	methylated-DNA-[protein]-cysteine S-methyltransferase activity	Interproscan
GO:0003724	Molecular Function	RNA helicase activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0000027	Biological Process	ribosomal large subunit assembly	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan