Gene detail

Detailed information of ANN28873-RA in Montipora grisea

Genomic Location: Scaffold_3079__1_contigs__length_38297:12534...13079
NR annotation: UCH38773.1, MAG: oligoribonuclease [Gammaproteobacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q0VME0	Oligoribonuclease OS=Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) OX=393595 GN=orn PE=3 SV=1
Q6D037	Oligoribonuclease OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=orn PE=3 SV=1
A1WTK7	Oligoribonuclease OS=Halorhodospira halophila (strain DSM 244 / SL1) OX=349124 GN=orn PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00929	RNase_T	Exonuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022894	Family	Oligoribonuclease	Interproscan
IPR013520	Domain	Exonuclease, RNase T/DNA polymerase III	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11046	OLIGORIBONUCLEASE, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000175	Molecular Function	3'-5'-RNA exonuclease activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13288	orn, REX2, REXO2; oligoribonuclease	EC:3.1.-.-	Ribosome biogenesis	ko03009	deepkoala