Detailed information of ANN28882-RA in Leptoseris scabra

Genomic Location: Scaffold_12__1_contigs__length_40020851:13572554...13576473
NR annotation: CAB3990678.1, DNA helicase [Paramuricea clavata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P35187ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SGS1 PE=1 SV=1
Q09811ATP-dependent DNA helicase hus2/rqh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rqh1 PE=1 SV=1
Q9TXJ8Putative ATP-dependent DNA helicase Q1 OS=Caenorhabditis elegans OX=6239 GN=K02F3.12 PE=3 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09382RQCRQC domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF16124RecQ_Zn_bindRecQ zinc-bindingDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004589FamilyDNA helicase, ATP-dependent, RecQ typeInterproscan
IPR018982DomainRQC domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR032284DomainATP-dependent DNA helicase RecQ, zinc-binding domainInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR002464Conserved_siteDNA/RNA helicase, ATP-dependent, DEAH-box type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13710DNA HELICASE RECQ FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0043138Molecular Function3'-5' DNA helicase activityInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005694Cellular ComponentchromosomeInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006268Biological ProcessDNA unwinding involved in DNA replicationInterproscan
GO:0009378Molecular Functionfour-way junction helicase activityInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan

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