Detailed information of ANN28885-RA in Montipora grisea

Genomic Location: Scaffold_4933__1_contigs__length_30741:19074...19724
NR annotation: MBT8437465.1, tRNA pseudouridine(55) synthase TruB [Gammaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A1K7B7tRNA pseudouridine synthase B OS=Azoarcus sp. (strain BH72) OX=418699 GN=truB PE=3 SV=1
Q3J9B8tRNA pseudouridine synthase B OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB 11848 / C-107) OX=323261 GN=truB PE=3 SV=1
A4VPN8tRNA pseudouridine synthase B OS=Stutzerimonas stutzeri (strain A1501) OX=379731 GN=truB PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09157TruB-C_2Pseudouridine synthase II TruB, C-terminalDomainInterproscan
PF01509TruB_NTruB family pseudouridylate synthase (N terminal domain)FamilyInterproscan
PF16198TruB_C_2tRNA pseudouridylate synthase B C-terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015240DomaintRNA pseudouridine synthase II, TruB, subfamily 1, C-terminalInterproscan
IPR014780FamilytRNA pseudouridine synthase II, TruBInterproscan
IPR036974Homologous_superfamilyPUA domain superfamilyInterproscan
IPR002501DomainPseudouridine synthase II, N-terminalInterproscan
IPR015947Homologous_superfamilyPUA-like superfamilyInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR032819DomaintRNA pseudouridylate synthase B, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13767TRNA-PSEUDOURIDINE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006400Biological ProcesstRNA modificationInterproscan
GO:1990481Biological ProcessmRNA pseudouridine synthesisInterproscan
GO:0006396Biological ProcessRNA processingInterproscan

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