Gene detail

Detailed information of ANN28897-RA in Montipora grisea

Genomic Location: Scaffold_2356__1_contigs__length_43447:27842...34135
NR annotation: OJW69879.1, MAG: redox-regulated ATPase YchF [Candidatus Amoebophilus sp. 36-38]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q7VMI2	Ribosome-binding ATPase YchF OS=Haemophilus ducreyi (strain 35000HP / ATCC 700724) OX=233412 GN=ychF PE=3 SV=3
Q9CP90	Ribosome-binding ATPase YchF OS=Pasteurella multocida (strain Pm70) OX=272843 GN=ychF PE=3 SV=3
P37518	Ribosome-binding ATPase YchF OS=Bacillus subtilis (strain 168) OX=224308 GN=ychF PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20600	ExoX-like_C	Exodeoxyribonuclease X-like C-terminal	Domain	Interproscan
PF01926	MMR_HSR1	50S ribosome-binding GTPase	Family	Interproscan
PF00929	RNase_T	Exonuclease	Family	Interproscan
PF06071	YchF-GTPase_C	Protein of unknown function (DUF933)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012676	Homologous_superfamily	TGS-like	Interproscan
IPR046768	Domain	Exodeoxyribonuclease X-like, C-terminal	Interproscan
IPR012675	Homologous_superfamily	Beta-grasp domain superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR031167	Domain	OBG-type guanine nucleotide-binding (G) domain	Interproscan
IPR013520	Domain	Exonuclease, RNase T/DNA polymerase III	Interproscan
IPR006073	Domain	GTP binding domain	Interproscan
IPR004396	Family	Ribosome-binding ATPase YchF/Obg-like ATPase 1	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR013029	Domain	YchF, C-terminal domain	Interproscan
IPR023192	Homologous_superfamily	TGS-like domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR041706	Domain	YchF, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23305	OBG GTPASE FAMILY	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan