Detailed information of ANN28911-RA in Leptoseris scabra

Genomic Location: Scaffold_12__1_contigs__length_40020851:14255908...14268500
NR annotation: XP_020600978.1, peroxiredoxin-1-like isoform X1 [Orbicella faveolata]
Species abbreviation LSCAB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q13162Peroxiredoxin-4 OS=Homo sapiens OX=9606 GN=PRDX4 PE=1 SV=1
P0CB50Peroxiredoxin-1 OS=Gallus gallus OX=9031 GN=PRDX1 PE=1 SV=1
O08807Peroxiredoxin-4 OS=Mus musculus OX=10090 GN=Prdx4 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001467 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00578
all species →		AhpC-TSAAhpC/TSA familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050217
all species →		FamilyThiol-specific antioxidant peroxiredoxinInterproscan
IPR013766
all species →		DomainThioredoxin domainInterproscan
IPR036249
all species →		Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR000866
all species →		DomainAlkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10681
all species →		THIOREDOXIN PEROXIDASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006979
all species →		Biological Processresponse to oxidative stressInterproscan
GO:0008379
all species →		Molecular Functionthioredoxin peroxidase activityInterproscan
GO:0033554
all species →		Biological Processcellular response to stressInterproscan
GO:0042744
all species →		Biological Processhydrogen peroxide catabolic processInterproscan
GO:0045454
all species →		Biological Processcell redox homeostasisInterproscan
GO:0016209
all species →		Molecular Functionantioxidant activityInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN28911-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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