Gene detail

Detailed information of ANN28913-RA in Leptoseris scabra

Genomic Location: Scaffold_12__1_contigs__length_40020851:14309684...14320860
NR annotation: CAH3135093.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN28913-RA

ATGCCTTTTATTTTTACAAACGAGAAACCCTTTCCTCAGATTTTTTTAGATTCCTTACTTCCTCATCTTGAAAGAAGAGGGCCAGATCACACAGGGAGAAAAGATTTTGATAGTAAAAATGATCACGGAACATATTACTTGAGCCTGATTGGTACGGTGCTTCATTTAAGAGGCAGGAAGACTCCTCAGCCATTGATCGATAAATGCGGAAATATCTTGTTATGGAATGGAGAAATATTTGGTGGAATTGAGGTAAAGGAGAATGAAAATGATTCTTTGGTCTTGCTAAACATTCTTTCCAGCCATGATTCAGACATCAGTTATTCTGAGCACATTCTTTCCACAATGGCTAAGGTTCAAGGTCCTTGGTCATTTGTGTACTGGCAGGAAGCTGAGCAGAAGCTATGGTTTGGTCGAGATTATTTTGGCCGTCGTAGCTTGTTATGGCATCTTCCATCAGATTCAGATGATGTTCTAGTGGTAACTTCTGTGGCTGAAAGAACCTCTACTACAAGTGATAAAAACCTGCATTTTGAAGAAATTCCTGCGGATGGCTTGTATTGTGTAGATTTACGGCTTGAAACAAGTGAACAGGATTACAAACTTCCTCTAACAATCAATAAATTCGACTGGAAGTACACCAACAAGAATACACAAGATCCTTTGTTCTTGATGTGCCCTATAGCACGGTTTAACAAGCAAATGCCTAATGAGCAGGATTTGCAAGTTATTGAAAAGAGCAGGCGAAGATTTTTCCCTCAAAAGAAGGAAGAAGAAAACGAAAACTTTGGAAAAGAACGTGAAACATTAGTTGCACAAGATAGCAGTACACAGGGAGCATTAGAAGAGCATGTGGTTGAAAACAATATTTCTAGTCTTGAAATTGCTGAGAATAAAACTGCGTTAGAGAATGTGGGAATCAGAGACGCGAGTTGTAATTCTGATCAACGGCTGCCGACTCTTGAAGATTGCGCCAGTGGCTTAAACGCAATGTTTAGTGCGGTTCACACAACGTCGTTAACAAGAAATACTGAAGTGGATGTTCCCAAGGTTCAGTCTTGCCGTGAATCAGCTGGGCTTTTAACTGACTCTGAAGGCTCCCAGGATTCTTGTGTGGGAATGCCAAGTGATATTTTGACTCCAACTGAAGCCAGCGACAGAAAAACTATCACAAAGGGAAGCAGTCAAAGTAGTTTACATAGAGCTAAATTAAATTCGACTTTTAACGAGGCAAGAGACACGTTTCTCGCTGTTCTTGGTGAAGCAGTGAAGAAACGTGTTTTTAACTTACCAAGAACAGAAAGCGATCCAGTTTCGCAGGGCTCGCAGGAAGCATCATCCAATTTGCCCTCACAGGTGGAAGATGCTCGAGTTGGTATTCTATTTTCGGGTGGAATTGATTCAATGATGATTGCAGCTTTGGCTGACAAATTTGTTCCTGCATGTGAAGCCATAGACCTTATCAATGTCGCATTTGAACGAAAATCGCAACCAGACAATCAGCAAAAGAGGAGTGGAAGGAAAGGAAAAGTGAAACACAATACAACAACAAAACCAGTAACGAGAAACTTTAGTGTTCCTGACAGAATAACTGGATTATCAGGTTTGGAAGAGCTACAACTCATTAACCCAGCGCGGCAGTGGAATTTTGTTGAGGTTGATGTAACGCTTGAAGAATTAAAGGAAATGAGATCCCGCCATATCAGCCACCTTGTGTCCCCCCTGAACACAGTCCTGGACGATAGTATTGGCTGTGCGTTGTGGTTTGCTGCCCGGGGGAGGGGGCGTTTACGCTCCTCCTGCAGGAAGGATACTCAAATGGGGGACGAAGAAGAAACATACACAAGCAAAGCCAAGGTTTTACTGGTTGGCATGGGAGCTGATGAGCAACTTGGAGGATATGCTAGGCACAGAACTCGGTTCATTAATGAAGGATGGTCGGGTTTAATGGACGAGATGGAAATGGAAGTGAAGCGAATATCAAAACGAAACCTCGGCCGCGATGATAGGTGTATATCGGACCATGGCAGGGAAGCAAGGTTTCCTTTTCTCGATGAAGAGGTTGTCTCGTTTCTAAACAGTCTGCCCGTTTGGATAAAGACGGATCCAGGCCTGCCGCGTGGGACTGGGGAGAAACTATTACTGCGTCAAGCGGCGAGGTTGCTTGGCTTGACATCATCATCGGAGCTGCCAAAGCGAGCGATTCAGTTTGGATCTCGGATTGCGAAATTGGAAAGCAGTGGTGAGAAAGGATCAGAGGCCTGCGCTAGACTGGAGTTCTAA

Transcript

ANN28913-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q0V8E4	Asparagine synthetase domain-containing protein 1 OS=Bos taurus OX=9913 GN=ASNSD1 PE=2 SV=1
Q4R5D4	Asparagine synthetase domain-containing protein 1 OS=Macaca fascicularis OX=9541 GN=ASNSD1 PE=2 SV=1
Q5ZJN0	Asparagine synthetase domain-containing protein 1 OS=Gallus gallus OX=9031 GN=ASNSD1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004954 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13537 all species →	GATase_7	Glutamine amidotransferase domain	Domain	Interproscan
PF00733 all species →	Asn_synthase	Asparagine synthase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029055 all species →	Homologous_superfamily	Nucleophile aminohydrolases, N-terminal	Interproscan
IPR017932 all species →	Domain	Glutamine amidotransferase type 2 domain	Interproscan
IPR001962 all species →	Domain	Asparagine synthase	Interproscan
IPR051857 all species →	Family	Asparagine synthetase domain-containing protein	Interproscan
IPR014729 all species →	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45937 all species →	ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004066 all species →	Molecular Function	asparagine synthase (glutamine-hydrolyzing) activity	Interproscan
GO:0006529 all species →	Biological Process	asparagine biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN28913-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.