Detailed information of ANN28953-RA in Leptoseris scabra

Genomic Location: Scaffold_12__1_contigs__length_40020851:14976980...14981327
NR annotation: XP_020619570.1, uncharacterized protein LOC110057317 [Orbicella faveolata]
Species Leptoseris scabra · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006918 (this species only)

 Pfam domain
No Pfam domain signature was detected for ANN28953-RA. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR039577
all species →		FamilyE3 ubiquitin-protein ligase Rad18Interproscan
IPR017907
all species →		Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14134
all species →		E3 UBIQUITIN-PROTEIN LIGASE RAD18Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003697
all species →		Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0006301
all species →		Biological Processpostreplication repairInterproscan
GO:0006513
all species →		Biological Processprotein monoubiquitinationInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN28953-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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