Gene detail

Detailed information of ANN29015-RA in Montipora grisea

Genomic Location: Scaffold_5986__1_contigs__length_28116:14095...16119
NR annotation: WP_185790343.1, ATP-dependent zinc metalloprotease FtsH [Winogradskyella flava]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN29015-RA

ATGGCAAACGATAATAATAACAATAACAAGAATTTAAACAAGAAACCAAAAGTAAGTCCTTATTGGATTTATGGTATTGTGATTGCAATCTTCCTTGGAATACAAATCGTTTCTGGTGGATTTGGTGGCTCTAGCGTAAAGCGAACGTCTCCTGCACAATTCATGGAGTATCTTGAAGATGGAGATGTAGCTAAACTTGAGATTATAAGAAATACTCACGTTGCCAATGTCTTTTTATCAAAAGAAGCCTTAGAAAAGGATAAACATAAAAATGCCAAATCTAAGAGCTTAATCCCTACAGTATCTGCAATACCAAACTATACGTTTGAGTTTGGAGACCTACAAAATTTCGAAAATGAAGTCAACAAGGTCATTGGAGACAAAAATCTCGACACAGAGTTGACCTTCGATACCGATCAAAATGTATGGGGTGATTTATTACTTACCCTCCTACCTTTTGTGTTGATCATAGGTGTTTGGATATTCATTATGAGACGTATGTCTTCTGGTGCAAGTGGTGGCGCAGGTGGACAAATATTCAATATAGGAAAATCTAGAGCAAAGCTGTTTGATGAAAAGTCGGATACTAAAACATCTTTCAAAGATGTAGCCGGACTTGAAGGTGCTAAAGAAGAGGTTCAGGAAATTGTAGATTTCCTTAAAAATCCTGAAAAGTATACATCATTAGGTGGAAAGATTCCAAAAGGTGCGTTACTTGTTGGCCCTCCAGGAACAGGTAAAACGCTTCTTGCCAAAGCAGTAGCTGGTGAAGCTAAAGTGCCTTTCTTCTCATTATCTGGTTCAGATTTTGTTGAAATGTTCGTAGGTGTTGGTGCTTCTAGAGTACGTGACCTCTTTAAACAAGCCAAAGAAAAATCGCCTTCAATCATTTTCATTGACGAAATTGATGCGATAGGTAGAGCAAGAGGTAAAAACAATTTCTCGGGTTCTAATGATGAACGCGAAAATACATTGAACCAGTTATTAACAGAAATGGATGGTTTTGGCACGAATACAAATGTTATCGTGTTAGCCGCTACCAACCGAGCAGATGTCCTTGACAAAGCCTTAATGCGTGCTGGTCGTTTTGATCGTCAAATCTTTGTTGATCTTCCAGACGTTAGAGAGCGAAAAGAGATTTTTGAAGTTCACTTAAAGCCCTTGAAAAAGGCCGACAACTTAGACGTAGATTTCTTAGCTAAGCAAACACCAGGTTTCTCTGGAGCTGACATTGCTAATGTTTGTAACGAAGCGGCTTTAATTGCTGCTAGGAACAATAAGAAAGCTGTAAACAAACAAGATTTCTTGGATGCAGTTGATAGAATTGTAGGTGGATTAGAAAAGAAAAATAAAATTATAACACCTGAAGAGAAACGTGCTGTTGCATTTCATGAAGCTGGTCATGCCACTGTAAGCTGGATGCTAGAGCATGCCGCTCCTCTGGTAAAAGTTACTATTGTACCTCGTGGACGTTCACTGGGTGCTGCTTGGTACTTACCTGAAGAACGTTTAATTGTTCGACCAGAACAAATGCTCGATGAAATGTGTGCTGCATTAGGTGGTAGAGCTGCTGAAAAAGTAATTTTCGATAAAATTTCTACAGGTGCGCTTAGCGATTTAGAAAAAGTAACAAAGCAAGCTAGAGCCATGGTTACTATCTATGGTTTGAGTGATAAAGTAGGTAACCTCACATACTATGACTCTTCTGGGCAATCTGAATATGGCGGTTTTACAAAGCCTTACAGTGAGCAAACTGCAGAACTAATTGATAAAGAGATTTCAGATATTATTGAAGAGCAATATCAGCGTGCGTTAAAGATTTTGGCAGACAATAAAGATAAGCTTACCGAGCTTGCAGAAGTTCTTTTGGAAAAAGAAGTAATCTTTAAAGACAATTTGGAAAAAATCTTTGGTAAACGACCATTTGATAAAGATAAATCTGAAGCACTAAAAGAAGAAAACGAAGATCCTGTTAAAGAATTCGATCTTAAGCAAAAAACACAAGAGGATACAGTAGAGGAATAA

Transcript

ANN29015-RA

Protein

Uniprot

Uniprot term	Description
A6LD25	ATP-dependent zinc metalloprotease FtsH OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / CIP 104284 / JCM 5825 / NCTC 11152) OX=435591 GN=ftsH PE=3 SV=1
D0MGU8	ATP-dependent zinc metalloprotease FtsH OS=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) OX=518766 GN=ftsH PE=3 SV=1
D5D8E3	ATP-dependent zinc metalloprotease FtsH OS=Karelsulcia muelleri (strain DMIN) OX=641892 GN=ftsH PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan
PF01434	Peptidase_M41	Peptidase family M41	Domain	Interproscan
PF17862	AAA_lid_3	AAA+ lid domain	Domain	Interproscan
PF06480	FtsH_ext	FtsH Extracellular	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050928	Family	ATP-dependent Zinc Metalloprotease	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR037219	Homologous_superfamily	Peptidase M41-like	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR005936	Family	ATP-dependent zinc metalloprotease, FtsH	Interproscan
IPR000642	Domain	Peptidase M41	Interproscan
IPR003960	Conserved_site	ATPase, AAA-type, conserved site	Interproscan
IPR041569	Domain	AAA ATPase, AAA+ lid domain	Interproscan
IPR011546	Domain	Peptidase M41, FtsH extracellular	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43655	ATP-DEPENDENT PROTEASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004222	Molecular Function	metalloendopeptidase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0004176	Molecular Function	ATP-dependent peptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03798	ftsH, hflB; cell division protease FtsH	EC:3.4.24.-	Chaperones and folding catalysts	ko03110	deepkoala