Gene detail

Detailed information of ANN29035-RA in Montipora grisea

Genomic Location: Scaffold_1533__1_contigs__length_53671:12091...12853
NR annotation: KAF1858042.1, hypothetical protein Lal_00010558 [Lupinus albus]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
C5D3U3	Small ribosomal subunit protein uS11 OS=Geobacillus sp. (strain WCH70) OX=471223 GN=rpsK PE=3 SV=1
B7GJ93	Small ribosomal subunit protein uS11 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) OX=491915 GN=rpsK PE=3 SV=1
Q5L3R3	Small ribosomal subunit protein uS11 OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=rpsK PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00411	Ribosomal_S11	Ribosomal protein S11	Family	Interproscan
PF00416	Ribosomal_S13	Ribosomal protein S13/S18	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001971	Family	Small ribosomal subunit protein uS11	Interproscan
IPR010979	Homologous_superfamily	Small ribosomal subunit protein uS13-like, H2TH	Interproscan
IPR018102	Conserved_site	Small ribosomal subunit protein uS11, conserved site	Interproscan
IPR027437	Homologous_superfamily	Small ribosomal subunit protein uS13, C-terminal	Interproscan
IPR019981	Family	Small ribosomal subunit protein uS11, bacterial-type	Interproscan
IPR001892	Family	Small ribosomal subunit protein uS13	Interproscan
IPR018269	Conserved_site	Small ribosomal subunit protein uS13, conserved site	Interproscan
IPR019980	Family	Small ribosomal subunit protein uS13, bacterial-type	Interproscan
IPR036967	Homologous_superfamily	Small ribosomal subunit protein uS11 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11759	40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003735	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840	Cellular Component	ribosome	Interproscan
GO:0006412	Biological Process	translation	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02952	RP-S13, rpsM; small subunit ribosomal protein S13	-	Ribosome	ko03011	deepkoala