Detailed information of ANN29054-RA in Leptoseris scabra

Genomic Location: Scaffold_12__1_contigs__length_40020851:16945166...16978592
NR annotation: CAH3178702.1, unnamed protein product, partial [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7TMA5Apolipoprotein B-100 OS=Rattus norvegicus OX=10116 GN=Apob PE=1 SV=1
P18709Vitellogenin-A2 OS=Xenopus laevis OX=8355 PE=1 SV=1
Q6RG02Vitellogenin OS=Penaeus merguiensis OX=71412 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01347Vitellogenin_NLipoprotein amino terminal regionRepeatInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan
PF09175Vit_b-sht_shellVitellinogen, beta-sheet shellDomainInterproscan
PF09172Vit_open_b-shtVitellinogen, open beta-sheetDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011030Homologous_superfamilyLipovitellin-phosvitin complex, superhelical domainInterproscan
IPR015817Homologous_superfamilyVitellinogen, open beta-sheet, subdomain 1Interproscan
IPR015819Homologous_superfamilyLipid transport protein, beta-sheet shellInterproscan
IPR050733FamilyVitellogenin/ApolipophorinInterproscan
IPR001747DomainVitellogenin, N-terminalInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR037088Homologous_superfamilyVitellinogen, beta-sheet shell domain superfamilyInterproscan
IPR015258DomainVitellinogen, beta-sheet shellInterproscan
IPR015255DomainVitellinogen, open beta-sheetInterproscan
IPR015816Homologous_superfamilyVitellinogen, beta-sheet N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23345VITELLOGENIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005319Molecular Functionlipid transporter activityInterproscan
GO:0006869Biological Processlipid transportInterproscan

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