Gene detail

Detailed information of ANN29060-RA in Montipora grisea

Genomic Location: Scaffold_1494__1_contigs__length_54295:33230...34738
NR annotation: WP_170325986.1, xanthine dehydrogenase small subunit [Ruegeria arenilitoris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P22985	Xanthine dehydrogenase/oxidase OS=Rattus norvegicus OX=10116 GN=Xdh PE=1 SV=3
Q8GUQ8	Xanthine dehydrogenase 1 OS=Arabidopsis thaliana OX=3702 GN=XDH1 PE=1 SV=1
P47989	Xanthine dehydrogenase/oxidase OS=Homo sapiens OX=9606 GN=XDH PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00111	Fer2	2Fe-2S iron-sulfur cluster binding domain	Domain	Interproscan
PF00941	FAD_binding_5	FAD binding domain in molybdopterin dehydrogenase	Family	Interproscan
PF03450	CO_deh_flav_C	CO dehydrogenase flavoprotein C-terminal domain	Domain	Interproscan
PF01799	Fer2_2	[2Fe-2S] binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001041	Domain	2Fe-2S ferredoxin-type iron-sulfur binding domain	Interproscan
IPR036884	Homologous_superfamily	[2Fe-2S]-binding domain superfamily	Interproscan
IPR002346	Domain	Molybdopterin dehydrogenase, FAD-binding	Interproscan
IPR016208	Family	Aldehyde oxidase/xanthine dehydrogenase-like	Interproscan
IPR014307	Domain	Xanthine dehydrogenase, small subunit	Interproscan
IPR005107	Domain	CO dehydrogenase flavoprotein, C-terminal	Interproscan
IPR036010	Homologous_superfamily	2Fe-2S ferredoxin-like superfamily	Interproscan
IPR036683	Homologous_superfamily	CO dehydrogenase flavoprotein, C-terminal domain superfamily	Interproscan
IPR036318	Homologous_superfamily	FAD-binding, type PCMH-like superfamily	Interproscan
IPR012675	Homologous_superfamily	Beta-grasp domain superfamily	Interproscan
IPR002888	Domain	[2Fe-2S]-binding	Interproscan
IPR016169	Homologous_superfamily	FAD-binding, type PCMH, subdomain 2	Interproscan
IPR012175	Family	Xanthine dehydrogenase, small subunit, bacteria	Interproscan
IPR016167	Homologous_superfamily	FAD-binding, type PCMH, subdomain 1	Interproscan
IPR016166	Domain	FAD-binding domain, PCMH-type	Interproscan
IPR006058	Binding_site	2Fe-2S ferredoxin, iron-sulphur binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45444	XANTHINE DEHYDROGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0004854	Molecular Function	xanthine dehydrogenase activity	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0071949	Molecular Function	FAD binding	Interproscan
GO:0051537	Molecular Function	2 iron, 2 sulfur cluster binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13481	xdhA; xanthine dehydrogenase small subunit	EC:1.17.1.4	Purine metabolism	ko00230	deepkoala