Detailed information of ANN29185-RA in Montipora grisea

Genomic Location: Scaffold_1744__1_contigs__length_50390:43572...45386
NR annotation: WP_014951051.1, MULTISPECIES: ATP-dependent RNA helicase DbpA [Alteromonas]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P21693ATP-dependent RNA helicase DbpA OS=Escherichia coli (strain K12) OX=83333 GN=dbpA PE=1 SV=2
Q73EU1DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus cereus (strain ATCC 10987 / NRS 248) OX=222523 GN=cshA PE=3 SV=1
A0R8U6DEAD-box ATP-dependent RNA helicase CshA OS=Bacillus thuringiensis (strain Al Hakam) OX=412694 GN=cshA PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03880DbpADbpA RNA binding domain DomainInterproscan
PF13840ACT_7ACT domain DomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000629Conserved_siteATP-dependent RNA helicase DEAD-box, conserved siteInterproscan
IPR050079FamilyDEAD box RNA helicaseInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR005580DomainDEAD box helicase DbpA/CsdA, RNA-binding domainInterproscan
IPR045865Homologous_superfamilyACT-like domainInterproscan
IPR027795DomainCASTOR, ACT domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47959ATP-DEPENDENT RNA HELICASE RHLE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000027Biological Processribosomal large subunit assemblyInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan

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