Genomic Location: Scaffold_223__1_contigs__length_141136:19047...20783
NR annotation: WP_110018113.1, choline dehydrogenase [Plasticicumulans acidivorans]
| CDS | |||||
| ANN29252-RA | |||||
| Transcript |
| ANN29252-RA |
| Protein |
| ANN29252-RA |
| Uniprot term | Description |
|---|---|
| B2FQ89 | Oxygen-dependent choline dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) OX=522373 GN=betA PE=3 SV=1 |
| B4SHV9 | Oxygen-dependent choline dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) OX=391008 GN=betA PE=3 SV=1 |
| Q1QXE1 | Oxygen-dependent choline dehydrogenase 1 OS=Chromohalobacter salexigens (strain ATCC BAA-138 / DSM 3043 / CIP 106854 / NCIMB 13768 / 1H11) OX=290398 GN=betA1 PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05199 | GMC_oxred_C | GMC oxidoreductase | Domain | Interproscan |
| PF00732 | GMC_oxred_N | GMC oxidoreductase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007867 | Domain | Glucose-methanol-choline oxidoreductase, C-terminal | Interproscan |
| IPR036188 | Homologous_superfamily | FAD/NAD(P)-binding domain superfamily | Interproscan |
| IPR011533 | Family | Oxygen-dependent choline dehydrogenase | Interproscan |
| IPR012132 | Family | Glucose-methanol-choline oxidoreductase | Interproscan |
| IPR000172 | Domain | Glucose-methanol-choline oxidoreductase, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11552 | GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0016614 | Molecular Function | oxidoreductase activity, acting on CH-OH group of donors | Interproscan |
| GO:0008812 | Molecular Function | choline dehydrogenase activity | Interproscan |
| GO:0019285 | Biological Process | glycine betaine biosynthetic process from choline | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0016491 | Molecular Function | oxidoreductase activity | Interproscan |
| GO:0050660 | Molecular Function | flavin adenine dinucleotide binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K00108 | betA, CHDH; choline dehydrogenase | EC:1.1.99.1 | Glycine, serine and threonine metabolism | ko00260 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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