Detailed information of ANN29263-RA in Montipora grisea

Genomic Location: Scaffold_928__1_contigs__length_67117:28741...29685
NR annotation: MCP4766331.1, 23S rRNA pseudouridine(1911/1915/1917) synthase RluD [Gammaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P65837Ribosomal large subunit pseudouridine synthase D OS=Salmonella typhi OX=90370 GN=rluD PE=3 SV=2
P65836Ribosomal large subunit pseudouridine synthase D OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=rluD PE=1 SV=2
Q8P682Ribosomal large subunit pseudouridine synthase D OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=rluD PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00849PseudoU_synth_2RNA pseudouridylate synthaseFamilyInterproscan
PF01479S4S4 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006145DomainPseudouridine synthase, RsuA/RluA-likeInterproscan
IPR006224Conserved_sitePseudouridine synthase, RluA-like, conserved siteInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR050188FamilyRluA Pseudouridine SynthaseInterproscan
IPR002942DomainRNA-binding S4 domainInterproscan
IPR036986Homologous_superfamilyRNA-binding S4 domain superfamilyInterproscan
IPR006225FamilyPseudouridine synthase, RluC/RluDInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06180rluD; 23S rRNA pseudouridine1911/1915/1917 synthaseEC:5.4.99.23
Ribosome biogenesisko03009deepkoala

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