Gene detail

Detailed information of ANN29264-RA in Montipora grisea

Genomic Location: Scaffold_928__1_contigs__length_67117:33455...35021
NR annotation: NCF35212.1, lipoyl synthase [Gammaproteobacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
B8GMV6	Lipoyl synthase OS=Thioalkalivibrio sulfidiphilus (strain HL-EbGR7) OX=396588 GN=lipA PE=3 SV=1
A1SZ17	Lipoyl synthase OS=Psychromonas ingrahamii (strain DSM 17664 / CCUG 51855 / 37) OX=357804 GN=lipA PE=3 SV=1
Q3J7W4	Lipoyl synthase OS=Nitrosococcus oceani (strain ATCC 19707 / BCRC 17464 / JCM 30415 / NCIMB 11848 / C-107) OX=323261 GN=lipA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04055	Radical_SAM	Radical SAM superfamily	Domain	Interproscan
PF16881	LIAS_N	N-terminal domain of lipoyl synthase of Radical_SAM family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007197	Domain	Radical SAM	Interproscan
IPR000544	Family	Octanoyltransferase	Interproscan
IPR004143	Domain	Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain	Interproscan
IPR045864	Homologous_superfamily	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	Interproscan
IPR003698	Family	Lipoyl synthase	Interproscan
IPR013785	Homologous_superfamily	Aldolase-type TIM barrel	Interproscan
IPR031691	Domain	Lipoyl synthase, N-terminal	Interproscan
IPR006638	Domain	Elp3/MiaA/NifB-like, radical SAM core domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10949	LIPOYL SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0009249	Biological Process	protein lipoylation	Interproscan
GO:0033819	Molecular Function	lipoyl(octanoyl) transferase activity	Interproscan
GO:0036211	Biological Process	protein modification process	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0009107	Biological Process	lipoate biosynthetic process	Interproscan
GO:0016992	Molecular Function	lipoate synthase activity	Interproscan
GO:0051539	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03644	lipA, LIAS, LIP1, LIP5; lipoyl synthase	EC:2.8.1.8	Lipoic acid metabolism	ko00785	deepkoala