Gene detail

Detailed information of ANN29271-RA in Montipora grisea

Genomic Location: Scaffold_3245__1_contigs__length_37406:32251...33555
NR annotation: MCH9663073.1, DDE-type integrase/transposase/recombinase [Gammaproteobacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P27401	Pro-Pol polyprotein OS=Simian foamy virus type 3 (strain LK3) OX=11644 GN=pol PE=3 SV=2
P23074	Pro-Pol polyprotein OS=Simian foamy virus type 1 OX=338478 GN=pol PE=1 SV=3
O93209	Pro-Pol polyprotein OS=Feline foamy virus OX=53182 GN=pol PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00665	rve	Integrase core domain	Domain	Interproscan
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR38681	RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan