Gene detail

Detailed information of ANN29357-RA in Montipora grisea

Genomic Location: Scaffold_1412__1_contigs__length_55581:28849...29418
NR annotation: WP_170351441.1, CoA transferase subunit B [Ruegeria atlantica]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P42316	Probable succinyl-CoA:3-ketoacid coenzyme A transferase subunit B OS=Bacillus subtilis (strain 168) OX=224308 GN=scoB PE=1 SV=1
B0RVK3	Succinyl-CoA:3-ketoacid coenzyme A transferase subunit B OS=Xanthomonas campestris pv. campestris (strain B100) OX=509169 GN=lpsJ PE=3 SV=1
P0C7I8	Succinyl-CoA:3-ketoacid coenzyme A transferase subunit B OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=lpsJ PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002898 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01144 all species →	CoA_trans	Coenzyme A transferase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012791 all species →	Domain	3-oxoacid CoA-transferase, subunit B	Interproscan
IPR004165 all species →	Family	Coenzyme A transferase family I	Interproscan
IPR037171 all species →	Homologous_superfamily	NagB/RpiA transferase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13707 all species →	KETOACID-COENZYME A TRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008410 all species →	Molecular Function	CoA-transferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01029	scoB; 3-oxoacid CoA-transferase subunit B	EC:2.8.3.5	Valine, leucine and isoleucine degradation	ko00280	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.