Gene detail

Detailed information of ANN29414-RA in Leptoseris scabra

Genomic Location: Scaffold_12__1_contigs__length_40020851:24873656...24877658
NR annotation: CAH3150989.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN29414-RA

ATGTTTTGTTCAAATTGTGGATGGGCTGTGGAAGATGGGGCAAATTTTTGCCCCAAGTGTGGTACAGGTCGGTGCATCACTGCCACATCTTCAGGAAACAACTCAGCTCATTCCTCCAAAGAGCAATCCAGTGAATGTATAGCAGGCCATTCTTCCACACCCTCTTCCTCAACTTCTGAAGTTAAGTCTTTCAGCATGTTCAAAAAACTGAAAGGCCATCAGTGGAAATCAATTGTAAGCAAGAAGACTGCAAGTGAGAAAGAGATTGATGTCCAAATCAACATTGGACTCATGGCTTGGAATGAAAAACAAATGGGCATCAAACCAAAGAGAGGCAAGCGTCTTGCTTTGAAAGTGTCCAACAAAGCCCCTTACAAAGTCATCTTGCAAAAAGCTGAGGAAAAGTGGAAAGCATTTCACAGTGACCTTTATGATGAGACGGAACAGTACGTTCTTGTGTTTGAAAGTGGTAATGAAGCACAGTTTCTTCCAGGTACATCTGCCAGTAAAGAGTTCTTTTCCCTCAAACGGTACAAAGAAGAAACCGGAAAGGACTACAATAAAATTGTGTTGTACCTCTGCTCGCTAAGTGACTTTAACTTTGACCCAGATACTAGTCAATCAGATAAAGATATTGAGGAGCTGGTCGAGGAGCCCGAGACGAAGCGTCTGAAAAACACAACAGATGAAAATCCTGAGGTATCCGATGTGGTGATTAGTGATGAGAAATTTGCGATTGAATTGCAAAGGGAGTTGGACAATGAGTTAAACGTCGACCTAAGCCTGATTAAAGCTGTTGAGAACATGGAGGACAGAAAAGATGACATGTCAATGAGTACTACCCATCAAGACACCCCCAGTTTGATTAAGTGCCTATCTGAGAAGGTTGATCAAGACGGTCAGTTTTTTATTGTTACCAGGAGAGGGTCTCCATTTCCAAGAGTTTTGTCCCTGTGGCAAAGAGAAGCCAGCAGATCATCTCCTGAAAAGGTTCTAAGGGTGCATTATAGTGGAGAGAATGGTGTAGACAGTGGTGCATTATCCCAAGAATTCCTGGCACAGACGATCACTGATATGCGGCTAGCAATGTTTCCAGATGGAGCACCCATAAATTCATTGTTCAATGTTCATAACAAGAATTTCAAAACCTGTGGGGAAATCATTGCAGTGTCTTTGGCTCAAGGAGGACCAGCGCCATCTTTATTGGATGAGAGTGTGTACCAGTTGATGTTAGACCCTGAAGTGGACATCAGCAACCTAGATATTGACAGACATTTTACTGAAAAGGACAAAGAGCTCTTCAATGCAGTAAGGGCTTGTGATACATTTGATGATGCTTTGTGTGATGTTATTTTAGAACATGGTTACACTGGCGTCATTGGTAACGATCACAAAGAGGATATTATTGGAACAATGCAAATTAGCATTATCACCAAGCGTTTGCTGTACTTGAAAGAATTTTGTGAAGGTCTGAAGCTTTATGGTGCCTATGATGCCATTAGGTGCAATGTTTCTTTATGCAAGCCTCTTTTTGTGAGAGGTTTAAATCAGGTCATAGATGCCAATTACGTCTTCTCTCTTGTCAATCCAAGCTACTCGGAACAAGGCTCATCAAAAAGGCCACTTGAAGAGGCAGTCATCGAAAACCTTCAAGATTTCCTAATATCATTAGAAGATGAAAACATAACTGGCTATTCCGAGCCAGTAGCATGGAAGGACTTTAATGAAAGAGACACTGACAGTAGTGAAGACTTCTCAGTGGATCGATTCCAGTCTATAGAAACAACACCATCGGGTGTACTGGGGTGGTTGACAGGCCAAAAACACCACCCCTTAAATGGAGAGCGGCTGGATGTCACTGCCCACTTCGACCATGATTGCTTTACAAGAAATCCTAATCACACGATCTGCTTTCCCCGTGTAGCAGCCTGCAGCAAGGAAATCACATTTCCGGTCACCCACATGACGACCCCGGAACAGTTTAAACATGTCTTTCTGCTTGCCATGTGCAAAGGAAATGCATTTGGAAATGCATAG

Transcript

ANN29414-RA

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity\|HECT

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13240	zinc_ribbon_2	zinc-ribbon domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026870	Domain	Zinc-ribbon domain	Interproscan
IPR035983	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22371	G2H3; G2/M phase-specific E3 ubiquitin-protein ligase	EC:2.3.2.26	Ubiquitin system	ko04121	deepkoala