Gene detail

Detailed information of ANN29601-RA in Montipora grisea

Genomic Location: Scaffold_1160__1_contigs__length_60670:17138...19764
NR annotation: ROL46693.1, Pogo transposable element with KRAB domain [Anabarilius grahami]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|PHD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03221	HTH_Tnp_Tc5	Tc5 transposase DNA-binding domain	Domain	Interproscan
PF03184	DDE_1	DDE superfamily endonuclease	Family	Interproscan
PF00628	PHD	PHD-finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006600	Domain	HTH CenpB-type DNA-binding domain	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR004875	Domain	DDE superfamily endonuclease domain	Interproscan
IPR001965	Domain	Zinc finger, PHD-type	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR019787	Domain	Zinc finger, PHD-finger	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR34718	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan