Gene detail

Detailed information of ANN29653-RA in Leptoseris scabra

Genomic Location: Scaffold_12__1_contigs__length_40020851:30292263...30297092
NR annotation: XP_044165403.1, adrenodoxin-like protein 1, mitochondrial [Acropora millepora]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P37193	Adrenodoxin-like protein 1, mitochondrial OS=Drosophila melanogaster OX=7227 GN=Fdx1 PE=2 SV=3
Q05B51	Ferredoxin-2, mitochondrial OS=Bos taurus OX=9913 GN=FDX2 PE=2 SV=2
Q6P4F2	Ferredoxin-2, mitochondrial OS=Homo sapiens OX=9606 GN=FDX2 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002135 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00111 all species →	Fer2	2Fe-2S iron-sulfur cluster binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001041 all species →	Domain	2Fe-2S ferredoxin-type iron-sulfur binding domain	Interproscan
IPR001055 all species →	Family	Adrenodoxin-like	Interproscan
IPR036010 all species →	Homologous_superfamily	2Fe-2S ferredoxin-like superfamily	Interproscan
IPR018298 all species →	Binding_site	Adrenodoxin, iron-sulphur binding site	Interproscan
IPR012675 all species →	Homologous_superfamily	Beta-grasp domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23426 all species →	FERREDOXIN/ADRENODOXIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0051536 all species →	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0051353 all species →	Biological Process	positive regulation of oxidoreductase activity	Interproscan
GO:0051537 all species →	Molecular Function	2 iron, 2 sulfur cluster binding	Interproscan
GO:0140647 all species →	Biological Process	P450-containing electron transport chain	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22071	FDX2; ferredoxin-2, mitochondrial	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.