Detailed information of ANN29743-RA in Montipora grisea

Genomic Location: Scaffold_1612__1_contigs__length_52413:34095...37301
NR annotation: MYJ26517.1, DNA-directed RNA polymerase subunit beta' [Holophagales bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q01VB2DNA-directed RNA polymerase subunit beta' OS=Solibacter usitatus (strain Ellin6076) OX=234267 GN=rpoC PE=3 SV=1
Q1IHH5DNA-directed RNA polymerase subunit beta' OS=Koribacter versatilis (strain Ellin345) OX=204669 GN=rpoC PE=3 SV=2
B3E7S9DNA-directed RNA polymerase subunit beta' OS=Trichlorobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) OX=398767 GN=rpoC PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04560RNA_pol_Rpb2_7RNA polymerase Rpb2, domain 7DomainInterproscan
PF00623RNA_pol_Rpb1_2RNA polymerase Rpb1, domain 2DomainInterproscan
PF04997RNA_pol_Rpb1_1RNA polymerase Rpb1, domain 1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038120Homologous_superfamilyRNA polymerase Rpb1, funnel domain superfamilyInterproscan
IPR045867FamilyDNA-directed RNA polymerase, subunit beta-primeInterproscan
IPR007641DomainRNA polymerase Rpb2, domain 7Interproscan
IPR000722DomainRNA polymerase, alpha subunitInterproscan
IPR007080DomainRNA polymerase Rpb1, domain 1Interproscan
IPR042102Homologous_superfamilyRNA polymerase Rpb1, domain 3 superfamilyInterproscan
IPR006592DomainRNA polymerase, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19376DNA-DIRECTED RNA POLYMERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003899Molecular FunctionDNA-directed 5'-3' RNA polymerase activityInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan

TOP