Gene detail

Detailed information of ANN29758-RA in Montipora grisea

Genomic Location: Scaffold_1021__1_contigs__length_64368:29318...30406
NR annotation: HCU91034.1, iron-sulfur cluster carrier protein ApbC [Gammaproteobacteria bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P0AF09	Iron-sulfur cluster carrier protein OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=mrp PE=3 SV=1
P0AF08	Iron-sulfur cluster carrier protein OS=Escherichia coli (strain K12) OX=83333 GN=mrp PE=1 SV=1
Q8ZNN5	Iron-sulfur cluster carrier protein OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=apbC PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003071 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01883 all species →	FeS_assembly_P	Iron-sulfur cluster assembly protein	Domain	Interproscan
PF10609 all species →	ParA	NUBPL iron-transfer P-loop NTPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044304 all species →	Family	Iron-sulfur protein NUBPL-like	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR002744 all species →	Domain	MIP18 family-like	Interproscan
IPR034904 all species →	Homologous_superfamily	Fe-S cluster assembly domain superfamily	Interproscan
IPR033756 all species →	Family	Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35	Interproscan
IPR000808 all species →	Conserved_site	Iron-sulfur cluster carrier protein-like, conserved site	Interproscan
IPR019591 all species →	Family	Mrp/NBP35 ATP-binding protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42961 all species →	IRON-SULFUR PROTEIN NUBPL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0016226 all species →	Biological Process	iron-sulfur cluster assembly	Interproscan
GO:0051536 all species →	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0051539 all species →	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan
GO:0140663 all species →	Molecular Function	ATP-dependent FeS chaperone activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03593	mrp, NUBPL; ATP-binding protein involved in chromosome partitioning	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.