Detailed information of ANN29795-RA in Leptoseris scabra

Genomic Location: Scaffold_12__1_contigs__length_40020851:33676917...33690860
NR annotation: XP_020617724.1, low-density lipoprotein receptor-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O57328Frizzled-1 OS=Gallus gallus OX=9031 GN=FZD1 PE=2 SV=1
Q9I9M5Frizzled-1 OS=Xenopus laevis OX=8355 GN=fzd1 PE=1 SV=1
O70421Frizzled-1 OS=Mus musculus OX=10090 GN=Fzd1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan
PF01392FzFz domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR020067DomainFrizzled domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000033RepeatLDLR class B repeatInterproscan
IPR036790Homologous_superfamilyFrizzled cysteine-rich domain superfamilyInterproscan
IPR051221FamilyLow-density lipoprotein receptor-relatedInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22722LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006898Biological Processreceptor-mediated endocytosisInterproscan
GO:0016324Cellular Componentapical plasma membraneInterproscan
GO:0042562Molecular Functionhormone bindingInterproscan
GO:0043235Cellular Componentreceptor complexInterproscan

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