Gene detail

Detailed information of ANN29894-RA in Montipora grisea

Genomic Location: Scaffold_612__1_contigs__length_83465:56402...57487
NR annotation: MCL5875602.1, phenylalanine--tRNA ligase subunit alpha [Candidatus Dependentiae bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q4KEW0	Phenylalanine--tRNA ligase alpha subunit OS=Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5) OX=220664 GN=pheS PE=3 SV=1
C3JZN3	Phenylalanine--tRNA ligase alpha subunit OS=Pseudomonas fluorescens (strain SBW25) OX=216595 GN=pheS PE=3 SV=1
A4XTS5	Phenylalanine--tRNA ligase alpha subunit OS=Ectopseudomonas mendocina (strain ymp) OX=399739 GN=pheS PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02912	Phe_tRNA-synt_N	Aminoacyl tRNA synthetase class II, N-terminal domain	Domain	Interproscan
PF01409	tRNA-synt_2d	tRNA synthetases class II core domain (F)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022911	Family	Phenylalanine-tRNA ligase alpha chain 1, bacterial	Interproscan
IPR010978	Homologous_superfamily	Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm	Interproscan
IPR004188	Domain	Phenylalanine-tRNA ligase, class II, N-terminal	Interproscan
IPR002319	Domain	Phenylalanyl-tRNA synthetase	Interproscan
IPR006195	Domain	Aminoacyl-tRNA synthetase, class II	Interproscan
IPR045864	Homologous_superfamily	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	Interproscan
IPR004529	Family	Phenylalanyl-tRNA synthetase, class IIc, alpha subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11538	PHENYLALANYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004826	Molecular Function	phenylalanine-tRNA ligase activity	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006432	Biological Process	phenylalanyl-tRNA aminoacylation	Interproscan
GO:0000049	Molecular Function	tRNA binding	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0043039	Biological Process	tRNA aminoacylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01889	FARSA, pheS; phenylalanyl-tRNA synthetase alpha chain	EC:6.1.1.20	Transfer RNA biogenesis	ko03016	deepkoala