Gene detail

Detailed information of ANN29905-RA in Leptoseris scabra

Genomic Location: Scaffold_12__1_contigs__length_40020851:35975401...35989404
NR annotation: CAH3144470.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN29905-RA

ATGAGTGCTGCACCGTTTACGGTGGAGATGATTTTTGTATTTCTGTTAACACTATGTCTTCTTCATCAGTATGGGAACTGGCGAAAACAGCACTGGCTTGTCACCATAGCTGTTTTTATTTCGTGGTATTTTTCCTTTCTTATTGTGTTCATTCTTCCTTTAGACGTCTCGGCGACATTCTACCGAAAATGCTTGGCGGAACAATTACACGGAGAAAAGAAAGATTTATTGTCAAACTCTAATCTATTCTCAAACTCGTCTGGAAATGATTCTGTGGCGAATGATAGCAAGGCCGATGATCCGACTATAAAGTGTGAGAAGCCCTGGAGTTTTTTACCAGACCAAGTTCTTCCTGATTTGTGGCGGGTAGTGTACTGGTCTTCTCAAATACTTTCATGGCTTATTCTGCCGATCATGCAGTCCTACTCTTATGCAGGAGATTTTACTGTACGTGGTAAAATCAAAACAGCATTATATGAGAATGCGCTGTGGTATGGCAGCTATCTTGTGATCTTTGGAATCCTTCTGATCTATGTTATTGTAAAGCCTGAACTCAAGTTAGATGGAACTTATTTGAAAATCATTGGTATCACTGCTTCAAACACATGGGGATTGCTCCTTCTTGTGTTCCTGATGGGATACGGTTTGGTTGAAGTGCCACGTGTCACATGGAATAGCGCCAGGCTGGAGTATCAGATGGCACATGCGTACTTTAAGATTTCAAAGCTTAGTGTGGAGAGAGAAGAGGCTGATGAACAGCTTACCGAAGTACTAGAGGAAGTAACTCAAGCATCAATAGCTCTGCGTTATAGACACCCTCTCAGAAAGTACCTTGACGTCATTATTAAAAAGTGCCCAGAATCATCGCAGTCCATGTTCAACAGAGGAACTGATGATTATGTTGACTATGACGACTATCTCAAAGAAACTGGAAGTAAAGTCACAGAAACATACACGGAGAAAAGCTTGGCAAAACTTCACAAGCGAGTCATTATCGTTACTCATACTTCAAAGCGTACACAGTGCCAGTGGAACATGCAGCTTGAAAAAGTGTTTGAATTAGAAGATCTTTCACGAAACACTGGAAGTAGTGACAGACATTACAAATCGTCATTGAGAGGGCCATCCAGTGGAGCTAAACCAGTTCTTGAATGGTACTGGAGGGTTTGGATCTGTCCATGGTTATTGCGTATCACAGCAGTGCTTCTGCTTTTGTTGTCTGTGACTCTTGTTTGGTCCGAGGTGACATTCTTCAATGTCAAGCCTGTGCTCTCAATCTACGCACAGATGATTCGTGGAGCAAGTGTTGGGTATTATTATTTCTACGTAGAGGTCATATCTTGTGTGACTATTTCCTACATGTGTGTCTGTGTTTATTACACAATTTTCAAAATGCGATTCTTCAACTATTACTACTTTGCACCAAAGCATCAGACCGATCCAAATAGCTTGCTGTTTAGTGGATTGCTGCTTTGTCGTCTGACGTATGCTTTGTCTCTAAACTTCCTTGCCGTTATTCATCTTGATGGTCATGTAACAGGAGCTGTTGAACCAGTAGAAACCTCATTCACAGCGTTCATGGGTCATATGGATGTGTTGTCTTTCATTTCCAAAGGAGTCAATGTGTATTATCCTATGTGTGTTGTACTGGTGTGTCTTGCGACATACTTCAGCCTAGGAACAAGGTGTCTTAACTGCCTTGGATTTCAAACATTTATCATTGAAGATGAAGTGTCAGCAGAATATGTCAGTGAGGGAAAGGATATTGCTCGAAGAGAGAGAAGGAAGAGGGAGATGTTGAGTGAAGATGGAAGTAGAAAGGAATCCTGGTCAGAAAGAGCTGAATCAGCCAAAAAGAAACTTTCAACACGCAGAGCAGAGCGTGAAGGGCTCCGCATGTCAGATAACAACCTTGCAACATCCAGCACAAATTTAGCATCAGACGGCCAGTATGTAAAGTATTCTAGATTTGACACTGAAAGTGATCGAGTTGAGCTGTTGTCTGCTACAGACTATGACCCCAATGGATCATTATCATCTTCAAGCTACAGTGCCACCCCCTCTGGGTATGGAAGATCATCTTCTAGTAGAGCACCAAAGAACATTTTTGATGATTTATAA

Transcript

ANN29905-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q68DH5	G-protein coupled receptor-associated protein LMBRD2 OS=Homo sapiens OX=9606 GN=LMBRD2 PE=1 SV=1
Q8C561	G-protein coupled receptor-associated protein LMBRD2 OS=Mus musculus OX=10090 GN=Lmbrd2 PE=1 SV=1
Q5F3F5	G-protein coupled receptor-associated protein LMBRD2 OS=Gallus gallus OX=9031 GN=LMBRD2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006504 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04791 all species →	LMBR1	LMBR1-like membrane protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051584 all species →	Family	GPCR-associated LMBR1 domain-containing protein	Interproscan
IPR006876 all species →	Family	LMBR1-like membrane protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21355 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN29905-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.