Detailed information of ANN29956-RA in Leptoseris scabra

Genomic Location: Scaffold_12__1_contigs__length_40020851:36963138...36976683
NR annotation: CAH3154311.1, unnamed protein product, partial [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96PZ7CUB and sushi domain-containing protein 1 OS=Homo sapiens OX=9606 GN=CSMD1 PE=1 SV=3
Q923L3CUB and sushi domain-containing protein 1 OS=Mus musculus OX=10090 GN=Csmd1 PE=1 SV=2
Q80T79CUB and sushi domain-containing protein 3 OS=Mus musculus OX=10090 GN=Csmd3 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF07699Ephrin_rec_likeTyrosine-protein kinase ephrin type A/B receptor-like DomainInterproscan
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR050751FamilyExtracellular matrix structural proteinInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR011641DomainTyrosine-protein kinase ephrin type A/B receptor-likeInterproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24034EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

TOP