Gene detail

Detailed information of ANN29969-RA in Leptoseris scabra

Genomic Location: Scaffold_12__1_contigs__length_40020851:37322042...37341420
NR annotation: KAJ7386522.1, Tubulin polyglutamylase ttll7 [Desmophyllum pertusum]
Species abbreviation LSCAB · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN29969-RA

ATGGAGATTCCACCGTCGCCTCGAACGCCTTCCGTTACCACAAACCACGATCTGGCTGAAAATTCGTCCGCCATGACAAAAGACAGCTTGAGTTTGGTTGAAACCAGCACAGCCGATGGTGATCTTGATAATCAAGGACAAGAAGGCGAATGTGTGGGAGCTGTTGGCGAGGATTTCGACGAAGATGAGGAACAAGTTCGAAGTCGTCTAAAAGTTCGAACGATTAACAATGTTCCTGCGTATGGCAAGCGTACAGGGAACAATTCCAACAGGAAGAAAACCGTTCGCAAACGCCGTGTCACGGCCAATCTATCTGCAACAAAATATGATATTGTTCGTAAAGTTTGTCTGCAAAGTGGAATGTATATAACAAGAGATGATGACTTTAATAGTTTTCTTATATGGAGTGACTCAGCTGTTCCTGTAGAAAGAATTATAGAACTGAAGTCCTTCCAGAAAATAAACCATTTTCCAAGTATGGGAGAAATATGCAGAAAGGACAACCTTGCTCGAAACATGGCAAAAATGCAGAGAGCTCACCCAGAAGAGTACAACTTTGTTCCACAAACATGGGTTTTGCCAGCAGAATATGCCACATTTCAAGGTTACTGTAGGGAACTTAAGAAGAGAAAGAAACACAAAACATTCATCATTAAGCCAGCTAATGGGGCTATGGGGAATGGAATTTCCTTGATCAGAAATGGAGATAGAGTCCCATCCCATGAACAGCTAGTAATACAAGAATATATTGACAGACCATTTGTTCTTGAGGGATTCAAGTTTGATCTTAGAGTGTATGTTTTAGTGACATCCTGTGATCCACTGAGGATATTTCTCTATAATGATGGCTTGGTTCGCATGGGGACGGAAGTTTATGAAGCCCCTTCAGATGAAAATCTGGATGAGCTCTTTATGCATCTTACTAATTATTCAATTAATAAACACAATGAGAATTTTGACCGTGACGACAGTGATGACAGTGGAAGTAAAAGGTCCATAAAATTTTTGAATGATTGGCTACAGTCAATGGATTATGATGTGAATTTTCTTTGGCACAACATAACAGATGTCCTTGTAAAGACATTGATAGTTGCTCAGCCGCACATTCTTCATTCATACCGCATGTGTCGACCCGGAGCACCGCCAGGAAGCGAAAGTGTCTGTTTTGAAGTTCTTGGGTTTGATATCTTGCTGGATAGAAAACTTAGACCTTGGCTTTTAGAGGTTAATCGTGCGCCAAGCTTTGGCACTGATACCAAACTGGACAGTGAAATCAAAGGAGGGGCGTTAACTGATACATTCAATTTACTAAATATCAGGGCCAGCGACAAAAGACGAGGCATAGCGGCAGAGAAGGCAGAAGCTCAAAAAAGATTGTTCATGCAGCCAAAAAGGAGCGAGTATTCTATGTCGGAACTAGAAAAGAAGAAGATGATTTTAAACAAACGACGAACGGAACTGAAAGACAGGCTCATACAGATAAGACGAGAGGCTGCAAGGGAGGAATTTGAGAATATGAACATGGGAAATTTTCGAAGGATTTACCCTCCGGAAGACAAAACAAGGCGAGAAAAGTACAACGGTCTCTTAGCTGATGCCTTCAAACTTTTCTTGTCAGGGAGAGCTGCATCTCTTCAGAAGGACGGCAATCAACCATTTAGCACTCTCAGGGAAGAGGAAATTCTTGATTTATTAGAGCAGTGTGAAGCTGACGAAACTATAACATTTGACATGAAATCTGGCAACCGCCCAATGAGTAAAGGACCGAAGCCTCTATCGTCTATGCCAAGCGCCAAATCGATCGCCAGCAAAGTTGATTCTTCATCATCCTCTTCTTCCGCCTCTTCAAACCCACCAGCCTCGTCTTCAGCATCGCTACTGACCTCAATAAGACCTGCGTCGGCTCAAAAGGCGCCAAACTCAGCCAATCACAGCTTTGTGTTACCGCGCTCCCTCACACAGAGGATCGTGACGTCATCGTCCTCTCCACCAATGAAATTCAACCCTGTAGTAGACTCGGCTTTCTTGGATGCAGCTGTACGAGAAAGAGAAGAGGAACTGAGTCGGCGAACGCTGGAAGCTTTGCTTGACATGAGGATAAAATTTCCGGGCAAAACGGACGAGGAAGCTGAAATGATTCTTGAGAGCATTCAAGACAATTGGAAATTTCATAAACCAAGAGTAGCATCCTATTGGCTCGTAAAACTTGATTCCATAAAGCGAAGAAAGGTTGTGGATATCGTACGAACAAACGTCCGCGTCATTTTGCAGCGGGTGTGGCGTGCCTCTGAGGTGGATAACTTGAGACTCTGCCGTGTATTCTCGCGAGTTTTCAACCGATTGTTATGGAGCCATGGACAGGGATTATGGAACTGCTTCTCAAATCTAGGGAATTCGTGGGAGACAATATTCAGCAAAAGCACAGATGTTTTGTCAGTGACTGAAATGAGCTGCTGCCGTCGGATTGTGCAACTGTGTCGTGACTGTCTACTTATTGTATACCAGTTTGCCGCTGACGCTAAAGCTGCGGGCGCTACCTCTGTTTCGTCTCAAGCAGCGATGCCTCAAGATGCTGACACAAGACAAACGCCGGATGTTACACGAAGGACTCCAGATCTTACATCACACCAAGCGTTAACCGCAAGAATGGCAAAGTTTTATAGAACAACTCAACTGACTCAAGGGCACTTGTGA

Transcript

ANN29969-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6ZT98	Tubulin polyglutamylase TTLL7 OS=Homo sapiens OX=9606 GN=TTLL7 PE=1 SV=2
F7E540	Tubulin polyglutamylase TTLL7 OS=Xenopus tropicalis OX=8364 GN=ttll7 PE=1 SV=2
A4Q9F0	Tubulin polyglutamylase TTLL7 OS=Mus musculus OX=10090 GN=Ttll7 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005589 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03133 all species →	TTL	Tubulin-tyrosine ligase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004344 all species →	Family	Tubulin-tyrosine ligase/Tubulin polyglutamylase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12241 all species →	TUBULIN POLYGLUTAMYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0036211 all species →	Biological Process	protein modification process	Interproscan
GO:0000226 all species →	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0005929 all species →	Cellular Component	cilium	Interproscan
GO:0015631 all species →	Molecular Function	tubulin binding	Interproscan
GO:0018095 all species →	Biological Process	protein polyglutamylation	Interproscan
GO:0070740 all species →	Molecular Function	tubulin-glutamic acid ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16583	TTLL7; tubulin polyglutamylase TTLL7	EC:6.3.2.62	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.