Gene detail

Detailed information of ANN30001-RA in Leptoseris scabra

Genomic Location: Scaffold_12__1_contigs__length_40020851:38207707...38232728
NR annotation: CAH3130586.1, unnamed protein product [Porites lobata]
Species Leptoseris scabra · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN30001-RA

ATGGCTTATGAAGGGATGTATTTGGTCATATTTCTGTTGGCATCGGCTTTGAAATGCAGTTATCAAGATGTCATTGATCACAGAGGAAAAGAATTTGTCATTAGTTACATCGCACAAAATCCCCGGCAGCAATTTACCGGAGAGAATGTCATTTTCCTTTCTTCTTTTGAAGACGTTAAAGTACGAATCTTACATCAGCAGCTGGATAAACAGCAAGACGTGAGCGCTGGAAATGTTGGCATAATCTCACTGCCTGGTAAAACACGCATGGGATTTTTCACGGGAAAACAAAACAAAGGCGTCCGTATCACTGCAAACAAACCCATATCCGTGTACGGACTTCAAACAAATTCTGGCAAAGGCGAGGGATTCCTTGGATTGCCTGTAGATTTCCTCGGCAAGCATTACATTGTATCAACGCTTGAACCGGCGATAAGCGCTGTCGTGCAAGTCACAGCAATAGAGGACAACACTAACGTCTCTATTAGGCTGAAATTACCAGAAGATGGAAGAGTAGTAGTTGGCGAGCAAGAATATTTGAACGGCGACTTCATAAATGCCACGCTTAATGACCTTGACGTGTTCCAAGTGCTAGGTGATTCTGATCTCAGTGGTACAACCGTGACGTCCTCGAAAGCAGTAGCTGTATTTTCGGGAAACCTGTGTGCTATGGAGCCCCAAGGTACACTTCCTTGCAACCAGCTAGTGGAGCAGATCCCCCCTGTGAGCGTTTGGGGTAATCACTTCATTACAAGCCCCTCACCAGATAATATTGGCGGAGATGTGTTTCATGTCATAGCTTCAAAGGATAGTACAGACATTCACGTTGATAAGCAGTTGAGAAAAACGCTGAACATAGGAGATAGATACGAGATTCGAGCACCGTGGAATACGTCATTGCAGATAATCACTTCTTACCCGTGTCTCGTTGTACAGTATACTAGCGGAGCTGGACAGAGTCCATTAATGAATTTGGTTCCTGCAAGAAATTGGTCAACTAACGACTACATAGTTTATGCTGCAGGCGATGATGCTTACATGAATGTAATTATCGAGACTAGCTTACGAAGTGAACTTCGCGTTAAGGGTCCGCTTAGCAATATTCCAATGAATTGGAAGATCCTTCCGGGAGGATTTTCAAGCGTTTCGCTTCATTTGAGTCAACGTGGTTTCTACCACATTTATCATGACAATCCTCTAAAGAAGTTTACGTCTGTGTTGTATGGGAAGATTTCGCAGACATTGTTTTCCTTTCCAGCCGGTTTGAGAAGGGAGCTAGGAAAAGATCCGAGTTGTTCAAAAACGACGACAAATGGCGGCGACAAAGTAGACAACGACTGCGATGGGAATACAGACGAAGAACTAGCCAATGACAAGGACGATGATGGTGACGGTTTGGTGGACGAAGATCTGGCCACGCCTCTTCCAAATGTTACCATGCCAAATGATTTTGTTTCGCCGCCATTAGTCTCATGCGGTGGGTCATCCAATGTTGCCGACCCAAAGCAACCAGGATTTCACCCAACGCTGCGACCGAACTCTGCACAGGGTGTGTGTTCTCTACGCGGCAAGATAACTATTAGTGGTCCTACGAATACACTTCGGAAGGTTCAAGGCTGTCAGCGTGAATTTGACCGAGTGTGGAAAGTGGAGGATTCTTGTCAGAATGTAATCACGCATACTCAGAAAATAAACATCATCACTCCAGGCGACCCAGTTCTTACTTTTCCAGACGACATTACACTCTTTTGTAGGGACAAGAAATACCTTGGGCCGCAATATACTGGTGAAGTTTTAAGGGATTTGAGCGTGTGTAGAAGGAATGCAACTATCACCCACACGGATCAGTACAGTGGGGATTGTTCCAAGAGTGAGGCCAGACTGGAGCGAGTGTGGTTAGTAGAAGACAAATGTCGTACAAATCAGCGCAACACTCAAGTAATCAAGCTGGTGCCTAAAGGGTCAAGACGAACAACTAACTACAAGACGTCATTTGCGATAACAAATGAAACATTTTCGCCTGAACTTACAGACAGAACCTCACTGATCTTCAAAAACCTTTCTGCAACTTTGGAAAAAGAGATGGAGAAGACATTCAGGCTTTCCAAACTAGGAAAGTTTTTCGTAGAAGCAAAGGTCCTCGGTTTTAGTAATGGCAGTGTTATTGTTGGAATGCTCGTTAAGATCGACATGCAGGCGCAGGTTAATCAGCAGGGACTTTTCTCCGTCATGAATGACACTCTAAGCCGTGGGCCATTGGGGAAATATCAAGTGGATCCCGGCTCAATTCGTTTACAAGACTTTGATGAATGCATATCACCCGATCTTAACAAGTGCCACGAGAAGGCCAAATGTACCAATACCCTCGGTTCCTACAACTGCACCTGTCTAGACGGATATTTTGGCGATGGGTTCCTTTGTCAAGCTCCACCCTCCATCGATTACGTTGACCCACCAATCGTATCCTCTACAGAGGAGAACGTGACACTTACGTGTCACGCAAGTGGTCTTCCAGATCCAACAATCACCTGGGTAACGCCTGATGACAAAATTGTCAATGCTTCACTTGCAATCTATGAAATCGAAGTCCTTGATGATGGTACTCATAAGACGAGAGGAAAAATACTTCAAAAGGACGGATCTCTTTTGGTTTCCGACACCCGTGTCCATGACCAAGGAATTTATAAGTGCGTTGCTGTCAATGTTATAGGAAAGGATGAAAGAAATGTTAATCTTACAGTCCGAAAAGATATCGTGGAGGTGGATGTTGCTATCACTCTTGAGGAGGAAGTATTTGATAATGAATTGGAGAACAAATCATCCGCAAGATACCAAGAGTTGGAGAAAAAAGTTGAAGAAGAGCTAACTGCGTTGTTCCAGGATATTGATGGATTCGAAAGAGTTGACATTCTTGGTTTTGTAAATGGCAGTGTCAAAGTACGTTTTCGAGTTGTCGTTAAAGTGGATAAATCTGACGAGAAAGAACCCTTGGTCGTCGCAAAGAAAGTTGGTAAAACGCTCAGAGTTAATGTGAAAGATGGCAAAATTGGCAGCCTTAAAGTGAAGCCGACTGTTAAGTTCAGAGAGGTTCCTCCGCCGCCCGTCAATCTGGGATCCAGTGACGTCACACAAACCGAAGCTATGATCACGTGGTCGCACCCTGAACTGCAAGAAATGTATTTCATAAGTGGCTACTCGCTGCAGTATAAAAAGTTTGGAAAGGGGCAGTGGGAGCAGTTCGCCTTCACTGGGGGAAACAACCACAGAATATCCGACCTGGAACATGATACGGCTTACTTAGTGCGGCTGAAATCCGAAAACGAGTTCGGAAGAGGAATCCCCAGTGAGAGCCTTGAACTGCTAACAGAGAAAAAGACAAACCCAGCAATATTGGCATTAGGTATTGTTGTTCCACTTCTCATTTTGGCCATGTTGGCGTTCGCAGCAGTTTTTGTTTATAGAAGATGGAAAAGGAAAAAGCAAGGATATCAAGCTACAGACGGAGAAGTGCCACTGCATCCGATCACAGTGGAGACGCAAAGCCAACCAGCAGCTACGAACGGACGATTTACGACCTTTGGCCATGATCGTTATGCCCATATCCCTGGCGAAGCACCAAACGGAGCAGGCGCAATCGCAATTGAAGCCTCGTTTTCATGGCGTGAAATACCACGTGACCGCGTCACGCTCGGCAAAGTTCTTGGTGAAGGCGAGTTTGGAATGGTGATGAAAGGAGAACTCAGTGAAGATGACGATCGTATTATACCCTGTGCTGTTAAGAAGTTAAAACGAGCCGCCACTGAAAGTGATTTTAAAGATTTGCTAAACGAACTGGAGATTATGGTGTCAGTGCGAAATCATCCGAATCTGGTCAACTTGATTGGCGCATGCTCAGTGGGGGGACCACTGATGATCTTGGTAGAATTTGCAGAGCACGGCAACCTTCTGCGCTATCTTCGTGATCACAGAAAGCAGAATTACGATGACATGAACCAATACACGCTGGAAATCAGTTCCGCGGAAAGACTGAGGATAGCTTCTGACGTGTCTAATGGAATGAAGCATCTTGCGGCAATGAAATGCGCTCACAGAGATCTGGCCGCAAGAAATGTGCTTCTCGGAGAGGGACTGGTGGCTAAAGTGTCTGATTTTGGTCTTTCACGTGATATCTACACCGATAACGTTTACGAGAAGAAAACTGCGGGGAAACTCCCAGCTAAGTGGATGGCGGTGGAATCTCTCGAACAAGGCATTTATACCAGTCAAAGTGATGTGTGGTCATTTGGTGTACTTCTTTGGGAAATCGAAACTGGAGGCTGCGCTCCATACGCTGGAATGGTTATGAGTGAGTTGCTCCCCAAACTGAAAGCCGGAAGTCGGTTGGACAAGCCTCGATACTGTACCGAATCGCTGTACTCAGTGATGCTTCGTTGCTGGAATGCAAATCCGAAGACTCGACCAAAATTTGATGAATTGAGTGACGAACTCCATCGCATGTACAAACAAGAAAGCGAATATTTGGAACCTGAAGATTACAGACTGGAACCAGATTATGTCAATACATCTGTGGAAAATATCTCCTCGGCTTAG

Transcript

ANN30001-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q02763	Angiopoietin-1 receptor OS=Homo sapiens OX=9606 GN=TEK PE=1 SV=2
Q02858	Angiopoietin-1 receptor OS=Mus musculus OX=10090 GN=Tek PE=1 SV=2
Q61851	Fibroblast growth factor receptor 3 OS=Mus musculus OX=10090 GN=Fgfr3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001017 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan
PF07679 all species →	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF17517 all species →	IgGFc_binding	IgGFc binding protein	Family	Interproscan
PF01390 all species →	SEA	SEA domain	Family	Interproscan
PF12947 all species →	EGF_3	EGF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR000082 all species →	Domain	SEA domain	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR013098 all species →	Domain	Immunoglobulin I-set	Interproscan
IPR035234 all species →	Domain	IgGFc-binding protein, N-terminal	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR050122 all species →	Family	Receptor Tyrosine Kinase	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR036364 all species →	Homologous_superfamily	SEA domain superfamily	Interproscan
IPR000152 all species →	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR018097 all species →	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan
IPR020635 all species →	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR024731 all species →	Domain	EGF domain	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416 all species →	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004714 all species →	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007169 all species →	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275 all species →	Biological Process	multicellular organism development	Interproscan
GO:0033674 all species →	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235 all species →	Cellular Component	receptor complex	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0004713 all species →	Molecular Function	protein tyrosine kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN30001-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.