Gene detail

Detailed information of ANN30036-RA in Montipora grisea

Genomic Location: Scaffold_7490__1_contigs__length_24755:8547...9809
NR annotation: WP_048118565.1, translation initiation factor IF-2 subunit gamma [Nitrosopumilus adriaticus]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O29663	Translation initiation factor 2 subunit gamma OS=Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16) OX=224325 GN=eif2g PE=3 SV=1
Q8PZA0	Translation initiation factor 2 subunit gamma OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) OX=192952 GN=eif2g PE=3 SV=1
O26361	Translation initiation factor 2 subunit gamma OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) OX=187420 GN=eif2g PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007527 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00009 all species →	GTP_EFTU	Elongation factor Tu GTP binding domain	Domain	Interproscan
PF09173 all species →	eIF2_C	Initiation factor eIF2 gamma, C terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015256 all species →	Domain	Initiation factor eIF2 gamma, C-terminal	Interproscan
IPR022424 all species →	Family	Translation initiation factor 2, gamma subunit	Interproscan
IPR050543 all species →	Family	Eukaryotic Initiation Factor 2 Gamma Subunit	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR009001 all species →	Homologous_superfamily	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	Interproscan
IPR009000 all species →	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan
IPR044128 all species →	Domain	Initiation factor eIF2 gamma, GTP-binding domain	Interproscan
IPR000795 all species →	Domain	Translational (tr)-type GTP-binding domain	Interproscan
IPR005225 all species →	Domain	Small GTP-binding protein domain	Interproscan
IPR044127 all species →	Domain	Initiation factor eIF2 gamma, domain 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42854 all species →	EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000049 all species →	Molecular Function	tRNA binding	Interproscan
GO:0001731 all species →	Biological Process	formation of translation preinitiation complex	Interproscan
GO:0003743 all species →	Molecular Function	translation initiation factor activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03242	EIF2S3; translation initiation factor 2 subunit 3	-	Translation factors	ko03012	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.