Gene detail

Detailed information of ANN30116-RA in Montipora grisea

Genomic Location: Scaffold_1506__1_contigs__length_54139:13258...13989
NR annotation: EED32723.1, GTP-binding protein Era [gamma proteobacterium NOR5-3]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A1U2V4	GTPase Era OS=Marinobacter nauticus (strain ATCC 700491 / DSM 11845 / VT8) OX=351348 GN=era PE=3 SV=1
A4XSC5	GTPase Era OS=Ectopseudomonas mendocina (strain ymp) OX=399739 GN=era PE=3 SV=1
Q48EV4	GTPase Era OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) OX=264730 GN=era PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0019764 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07650 all species →	KH_2	KH domain	Domain	Interproscan
PF01926 all species →	MMR_HSR1	50S ribosome-binding GTPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005662 all species →	Family	GTPase Era	Interproscan
IPR009019 all species →	Homologous_superfamily	K homology domain superfamily, prokaryotic type	Interproscan
IPR004044 all species →	Domain	K Homology domain, type 2	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR015946 all species →	Homologous_superfamily	K homology domain-like, alpha/beta	Interproscan
IPR005225 all species →	Domain	Small GTP-binding protein domain	Interproscan
IPR006073 all species →	Domain	GTP binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42698 all species →	GTPASE ERA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000028 all species →	Biological Process	ribosomal small subunit assembly	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0019843 all species →	Molecular Function	rRNA binding	Interproscan
GO:0043024 all species →	Molecular Function	ribosomal small subunit binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03595	era, ERAL1; GTPase	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.