Gene detail

Detailed information of ANN30308-RA in Montipora grisea

Genomic Location: Scaffold_284__1_contigs__length_124932:39068...42679
NR annotation: WP_089370691.1, thiamine pyrophosphate-binding protein [Dokdonia pacifica]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN30308-RA

ATGGCTACAACTAAAAAATGGTATAAAGTTCTCGAAAACAAAAACGTACTACCGGAAGGACGCGTTCAAACGGTAACTGCGGGTCATCAAGGTATATGTTTGACACATTACGACGGGAAGTTTTCTGCATTAGACAACAGATGTCCACATCAAGGAGGTCCTTTAGGCGAAGGATCTATTGAAGACGGAATGTTACGTTGTCCTTGGCATGGATGGGATTTTCATCCTTGTACAGGATTGCCTCCAGGAGGATATGACGATGGGGTAAAAACATTTGAAGTAAAAGAAGAAGGAGATGAAATTTTTGTAGCTGTTGAGGAAGAAGTTGAACATGAAGATACCATTTCTGATGTGATGGTAGAAACTATGGTCAATTGGGGTGTAGATACTGGTTTTGGAATGGTAGGACATTCTAATCTTGGTGTAGCAGACGCTATGATGCGACAAGAAGAAAAAGGAAAATTTCAATTCTTTGGTATTCGCCATGAGGGAGCTGCAGCTTTTGCCGCTTCTGCTTATGGAAAACTAATGGGAAAACCTGCTGTGTGTTTTGGAATTGCAGGTCCTGGATCTACCAATATGTATACTGGAATGTGGGATGCCAAAGTAGATCGGGCTCCATTACTAGCTATCTCTGGACAAGTAAATACACAAGTATTAGGAACAGGCGCATTTCAGGAAGTAGATCTTGTTGCCGCTTTTCAAACCGTAGCCCATTTTAATCATAGCGTACAACAAAATTCCAAGCATAGTGAATTAATGAGTCTTGCCATAAAGAGTGCGTTATTAAATAGAGATGTTTCTCATATTACCTTTCCCGATGAAGTTGCTTTTATGCCAAAACCAAAGAGTGAAGAAGCACAAACTCCTGAAGGAAGAATTACCCCTATGAACATTTCGCCGCCAAGGCAAATGGTAGCACAAGCCGTCGATTTACTATCTAAATCTGAAAAACCAGCTATCATTGTAGGACATGGCGCTCGTTTCCATATGGATGCGATTACCGCTTTCGCGAAAACATTACAATGCCCGGTTATTACTACCTTTAAAGGAAAAGGTCTTATCGCAGATGAACATGAATTAGGTTGTGGGGTTTTAGGTAGAAGTGGTACTCCTATAGCATCATGGTTTATGAACGAAAGTGATGTATTACTCGTATTTGGAGCATCCTTCTCTAACCATACCGGGATTACACCTAAAAAACCAATCATTCAGGTAGATTATGATCCAACAGCATTAAGTAAATTCCATAAAGTAGATGTAGCCCTTTGGGGAGAGATTTCAGAAACACTTACTATTCTGGAAGAAGAAACCGAAGGGAAATTAAATACGATAGACAGACGTGCAGAGATTGCAGAAAGATGGGCAATCTGGAAGGAAGAAAAACAAAGCAGATTAAAAGATGAAAGTGAGATAGGATTAAGCTCTATTGCTGTATTTGACGCCATGAATCAAGTAGTACCTGACGATGCTGTAATTGCTGTAGATGTTGGAAACAACACCTATTCCTTTGGGCGTTATTTTGAACCAAAAAATCAATCGATACTGATGTCTGGATATTTAGGATCTATCGGATTTTCACTACCTGCAGCTATGGGAGCATGGGCTGCACAAGGAAAAGAAAGGCCTATCTGGTCTGTCTCTGGAGATGGTGGTTTTGGACAGTATCTCGGAGAGATGATGACTTTGGTGAAGTACAATATGAATATCAAGCATGTATTACTTAATAATTCTGAATTAGGGAAAATTTCTAAAGAACAGAAAGCCGCAGAATTAGATGTATGGAAGACATCGCTTCATAATATTATCCCAACTATTATTCTGACCTATCTAGCAATAGGCCTCGTATTTGGAATTTATTTCTTTATGCGAGGCGCTGCACAGATGGATGATCTTATAAAAGATAGTGCTTTTCAGCAACAGCCTTCTGTTACTGTCATTGCTTTCTTAGGAATAGGATTTGTAACCATTGCTTCTTTACATATTATAACAGCTTTTAAAGAAGCCAAGGTTGATAATAGCAAAACAACGCACGAAGATGAAGGATGGGAATATGTATGTGATATTGATGACATTGTTGAAGACAGGGCTAAGATTTTTATTGTAGGCAAGGAACGTGTCGCTATTTTCAAATATGACAATAAACTATCAGCTATTGCCAATGTGTGTAAACACCAGGGAGGACCTTTAGGAGAAGGTAAAATTGTAGATGGATGTATTACTTGTCCGTGGCATGGATACCAATACCTTCCCCATAATGGTCAATCCCCTCCTCCATTTACTGAAAAAGTGGCTACTTATCGTTTAAAAAATAAAAATAATGGCATCTATATTCTACCTGAAGCACTAGCCGAAGGTACCGAAGTAGAACCTGTTACATTTTAA

Transcript

ANN30308-RA

Protein

Uniprot

Uniprot term	Description
P96591	Putative thiamine pyrophosphate-containing protein YdaP OS=Bacillus subtilis (strain 168) OX=224308 GN=ydaP PE=2 SV=1
P37063	Pyruvate oxidase OS=Lactiplantibacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1) OX=220668 GN=pox5 PE=1 SV=3
P07003	Pyruvate dehydrogenase [ubiquinone] OS=Escherichia coli (strain K12) OX=83333 GN=poxB PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00355	Rieske	Rieske [2Fe-2S] domain	Domain	Interproscan
PF02775	TPP_enzyme_C	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain	Domain	Interproscan
PF00205	TPP_enzyme_M	Thiamine pyrophosphate enzyme, central domain	Domain	Interproscan
PF02776	TPP_enzyme_N	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036922	Homologous_superfamily	Rieske [2Fe-2S] iron-sulphur domain superfamily	Interproscan
IPR017941	Domain	Rieske [2Fe-2S] iron-sulphur domain	Interproscan
IPR011766	Domain	Thiamine pyrophosphate enzyme, TPP-binding	Interproscan
IPR029061	Homologous_superfamily	Thiamin diphosphate-binding fold	Interproscan
IPR047210	Domain	Pyruvate oxidase POXB-like, pyrimidine-binding domain	Interproscan
IPR029035	Homologous_superfamily	DHS-like NAD/FAD-binding domain superfamily	Interproscan
IPR047211	Family	Pyruvate oxidase/Pyruvate dehydrogenase [ubiquinone]-like	Interproscan
IPR012000	Domain	Thiamine pyrophosphate enzyme, central domain	Interproscan
IPR012001	Domain	Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42981	PYRUVATE DEHYDROGENASE [UBIQUINONE]	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0051537	Molecular Function	2 iron, 2 sulfur cluster binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0030976	Molecular Function	thiamine pyrophosphate binding	Interproscan
GO:0000287	Molecular Function	magnesium ion binding	Interproscan