Gene detail

Detailed information of ANN30363-RA in Montipora grisea

Genomic Location: Scaffold_129__1_contigs__length_205575:155305...155868
NR annotation: MYD96377.1, oligoribonuclease [Gammaproteobacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A3QAD3	Oligoribonuclease OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) OX=323850 GN=orn PE=3 SV=1
Q3SHU1	Oligoribonuclease OS=Thiobacillus denitrificans (strain ATCC 25259 / T1) OX=292415 GN=orn PE=3 SV=1
A1U4D2	Oligoribonuclease OS=Marinobacter nauticus (strain ATCC 700491 / DSM 11845 / VT8) OX=351348 GN=orn PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00929	RNase_T	Exonuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022894	Family	Oligoribonuclease	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR013520	Domain	Exonuclease, RNase T/DNA polymerase III	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11046	OLIGORIBONUCLEASE, MITOCHONDRIAL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000175	Molecular Function	3'-5'-RNA exonuclease activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13288	orn, REX2, REXO2; oligoribonuclease	EC:3.1.-.-	Ribosome biogenesis	ko03009	deepkoala